Informatics
- Denny JC, Smithers JD, Miller RA, Spickard A. "Understanding" medical school curriculum content using KnowledgeMap. Journal of the American Medical Informatics Association : JAMIA. 10(4). 351-62.
- Gamazon ER, Wheeler HE, Shah KP, Mozaffari SV, Aquino-Michaels K, Carroll RJ, Eyler AE, Denny JC, Nicolae DL, Cox NJ, Im HK. A gene-based association method for mapping traits using reference transcriptome data. Nature genetics. 2015 Sep;47(9). 1091-8. NIHMSID: NIHMS706045.
- Schildcrout JS, Shi Y, Danciu I, Bowton E, Field JR, Pulley JM, Basford M, Gregg W, Cowan J, Harrell FE, Roden DM, Peterson JF, Denny JC. A prognostic model based on readily available clinical data enriched a preemptive pharmacogenetic testing program. Journal of clinical epidemiology. 2015 Nov 25.
- Coding Variation in ANGPTL4, LPL, and SVEP1 and the Risk of Coronary Disease. The New England journal of medicine. 2016 Mar 24;374(12). 1134-44.
- Wei WQ, Teixeira PL, Mo H, Cronin RM, Warner JL, Denny JC. Combining billing codes, clinical notes, and medications from electronic health records provides superior phenotyping performance. Journal of the American Medical Informatics Association : JAMIA. 2015 Sep 2.
- Mo H, Thompson WK, Rasmussen LV, Pacheco JA, Jiang G, Kiefer R, Zhu Q, Xu J, Montague E, Carrell DS, Lingren T, Mentch FD, Ni Y, Wehbe FH, Peissig PL, Tromp G, Larson EB, Chute CG, Pathak J, Denny JC, Speltz P, Kho AN, Jarvik GP, Bejan CA, Williams MS, Borthwick K, Kitchner TE, Roden DM, Harris PA. Desiderata for computable representations of electronic health records-driven phenotype algorithms. Journal of the American Medical Informatics Association : JAMIA. 2015 Nov;22(6). 1220-30.
- Hoffman JM, Dunnenberger HM, Kevin Hicks J, Caudle KE, Whirl Carrillo M, Freimuth RR, Williams MS, Klein TE, Peterson JF. Developing knowledge resources to support precision medicine: principles from the Clinical Pharmacogenetics Implementation Consortium (CPIC). Journal of the American Medical Informatics Association : JAMIA. 2016 Mar 28.
- Wehbe FH, Armstrong BK, Peachey MR, Denny JC, Spickard A. Formative evaluation to guide early deployment of an online content management tool for medical curriculum. AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 1049 p.
- Roden DM, Denny JC. Integrating electronic health record genotype and phenotype datasets to transform patient care. Clinical pharmacology and therapeutics. 2015 Dec 14.
- Denny JC, Irani PR, Wehbe FH, Smithers JD, Spickard A. The KnowledgeMap project: development of a concept-based medical school curriculum database. AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 195-9.