PheMap

Neil Zheng, Wei-Qi Wei
November 4, 2019
Posted in

PheMap is a multi-resource knowledgebase for high-throughput phenotyping within electronic health records (EHR).  The knowledgebase quantifies relationships between phenotypes and relevant concepts represented by standard medical terminologies. PheMap assigns a score and probability of having a phenotype from identified concepts within EHRs.

DEB2 -- Drug Evidence Base, Version 2.0

Joshua Carl Smith
August 23, 2019
Posted in

DEB2 is a medication indication and adverse effect knowledgebase derived from five publicly available sources: the VA’s National Drug File-Reference Terminology, MEDLINE, the US Food and Drug Administration’s drug product labels (via the SIDER2 database), the MedlinePlus consumer health information website, and DrugBank, a manually-curated drug target database. All medications, indications, and adverse effects in DEB2 are represented using the RxNorm and SNOMED-CT terminologies.