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Recommended Reading - March & April 2024

calvikn1 — Mon, 19 Feb 2024 21:24:33 +0000

Recommended Reading - March & April 2024 calvikn1 Mon, 02/19/2024 - 15:24 RSS:

VI4 Curation Team

Dopamine transients follow a striatal gradient of reward time horizons. Mohebi A, et al. in Nature Neuroscience, February 6, 2024
Bacteriophage infection and killing of intracellular Mycobacterium abscessus. Schmalstig A, et al. in mBio, December 7, 2023
ADAR1p150 prevents MDA5 and PKR activation via distinct mechanisms to avert fatal autoinflammation. Hu Shi-Bin, Et al. in Molecular Cell, November 2, 2023
Long 3'UTRs predispose neurons to inflammation by promoting immunostimulatory double-stranded RNA formation. Dorrity T, et al. in Science Immunology, October 27, 2023
Microbiota-derived butyrate restricts tuft cell differentiation via histone deacetylase 3 to modulate intestinal type 2 immunity. Eshleman E, et al. in Cell Immunity, February 1, 2024

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reading list, infection, inflammation, neuroscience, microbiome

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Recommended Reading - January & February 2024

calvikn1 — Wed, 17 Jan 2024 21:30:23 +0000

Recommended Reading - January & February 2024 calvikn1 Wed, 01/17/2024 - 15:30 RSS:

VI4 Curation Team

Synthetic Glycans Reveal Determinants of Antibody Functional Efficacy against a Fungal Pathogen. Crawford C, et al. in ACS Infectious Diseases, October 19, 2023
Emapalumab for the treatment of refractory cytokine release syndrome in pediatric patients. Schuelke M, et al. in Blood Advances, September 18, 2023
Molecular jackhammers eradicate cancer cells by vibronic-driven action. Ayala-Orozco C, et al. in Nature Chemistry, December 19, 2023
Kupffer cell–like syncytia replenish resident macrophage function in the fibrotic liver. Peiseler M, et al. in Science, September 9, 2023
A geometry-based approach to make viable-cell counting easy and cheap. Meyer C, et al. in Nature Microbiology, November 22, 2023

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reading list, infection, inflammation, Cancer immunology, evolution, microbiology

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Recommended Reading - December 17th, 2023

calvikn1 — Mon, 18 Dec 2023 21:17:23 +0000

Recommended Reading - December 17th, 2023 calvikn1 Mon, 12/18/2023 - 15:17 RSS:

VI4 Curation Team

Probiotic-guided CAR-T cells for solid tumor targeting. Vincent R, et al. in Science, October 12, 2023
A Candida auris–specific adhesin, Scf1, governs surface association, colonization, and virulence. Santana D, et al. in Science, September 28, 2023
E-selectin-mediated rapid NLRP3 inflammasome activation regulates S100A8/S100A9 release from neutrophils via transient gasdermin D pore formation. Peruenster M, et al. in Nature Immunology, October 30, 2023
Selection of a de novo gene that can promote survival of Escherichia coli by modulating protein homeostasis pathways. Idan Frumkin & Michael T. Laub. in Nature Ecology & Evolution, November 9, 2023
Discovery of antibiotics that selectively kill metabolically dormant bacteria. Zheng E, et al . in PNAS, November 28, 2023

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reading list, Cancer immunology, infection, inflammation, evolution, microbiology

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Recommended Reading - November 19th, 2023

calvikn1 — Sun, 19 Nov 2023 18:53:35 +0000

Recommended Reading - November 19th, 2023 calvikn1 Sun, 11/19/2023 - 12:53 RSS:

VI4 Curation Team

Type I interferons and Mycobacterium tuberculosis whole cell lysate induce distinct transcriptional responses in M. tuberculosis infection. Mutua F, et al. in Tuberculosis, September 11, 2023
Activation of AIM2 by hepatitis B virus results in antiviral immunity that suppresses hepatitis C virus during coinfection. Li Y, et al. in Journal of Virology, August 28, 2023
Divergent Actions of Renal Tubular and Endothelial Type 1 IL-1 Receptor Signaling in Toxin-Induced AKI. Ren J, et al. in Journal of the American Society of Nephrology, October 1, 2023
CD8 T cell tolerance results from eviction of immature autoreactive cells from the thymus. Badr M, et al. in Science, November 2, 2023
Sialic acid plays a pivotal role in licensing Citrobacter rodentium’s transition from the intestinal lumen to a mucosal adherent niche. Liang Q, et al. in PNAS, July 3, 2023

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reading list, infection, immunology, Cancer immunology, microbiome

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Recommended Reading - October 8th, 2023

calvikn1 — Mon, 09 Oct 2023 20:10:42 +0000

Recommended Reading - October 8th, 2023 calvikn1 Mon, 10/09/2023 - 15:10 RSS:

VI4 Curation Team

ApoE isoform– and microbiota-dependent progression of neurodegeneration in a mouse model of tauopathy. Seo DO, et al. in Science, January 13, 2023
Heteroresistance to cefepime– taniborbactam in metallo-β-lactamaseencoding Enterobacterales. Weiss D, et al. in The Lancet, July 5, 2023
Effect of Micro-Patterned Mucin on Quinolone and Rhamnolipid Profiles of Mucoid Pseudomonas aeruginosa under Antibiotic Stress. Bohn, P W, et al. in ACS Infectious Diseases, December 13, 2022
Systemic application of bone-targeting peptidoglycan hydrolases as a novel treatment approach for staphylococcal bone infection. Keller A, et al. in mBio, September 28, 2023
Variant STAT4 and Response to Ruxolitinib in an Autoinflammatory Syndrome. Baghdassarian H, et al. in The New England Journal of Medicine, June 15, 2023

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microbiome, infection, inflammation, reading list

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Recommended Reading - September 17th, 2023

calvikn1 — Mon, 18 Sep 2023 17:22:38 +0000

Recommended Reading - September 17th, 2023 calvikn1 Mon, 09/18/2023 - 12:22 RSS:

VI4 Curation Team

Phage diversity in cell-free DNA identifies bacterial pathogens in human sepsis cases. Haddock N, et al. in Nature Microbiology, June 12, 2023
Biofilm formation on human immune cells is a multicellular predation strategy of Vibrio cholerae. Vidakovic L, et al. in Cell, May 8, 2023
PD-1 maintains CD8 T cell tolerance towards cutaneous neoantigens. Damo M, et al. in Nature, June 21, 2023
Individual bat virome analysis reveals co-infection and spillover among bats and virus zoonotic potential. Wang J, et al. in Nature Communications, July 10, 2023
Influenza A virus coinfection dynamics are shaped by distinct virus-virus interactions within and between cells. Delima G, et al. in PLOS Pathogens, March 2, 2023

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reading list, microbiome, infection, Cancer immunology

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Recommended Reading - August 8th, 2023

calvikn1 — Fri, 04 Aug 2023 17:06:14 +0000

Recommended Reading - August 8th, 2023 calvikn1 Fri, 08/04/2023 - 12:06 RSS:

VI4 Curation Team

The enteric nervous system relays psychological stress to intestinal inflammation. Schneider K, et al. in Cell, May 5, 2023
Viriforms—A New Category of Classifiable Virus-Derived Genetic Elements. Kuhn J & Koonin E. in Biomolecules, February 13, 2023
De novo evolution of macroscopic multicellularity. Bozdag G. O, et al. in Nature, May 10, 2023
Droplet Tn-Seq identifies the primary secretion mechanism for yersiniabactin in Yersinia pestis. Price, S, et al. in EMBO Reports, July 28, 2023
Ectocytosis renders T cell receptor signaling self-limiting at the immune synapse. Stinchcombe J, et al. in Science, May 23, 2023

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reading list, inflammation, infection, microbiome, Cancer immunology

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Recommended Reading - July 9th, 2023

calvikn1 — Thu, 06 Jul 2023 19:16:35 +0000

Recommended Reading - July 9th, 2023 calvikn1 Thu, 07/06/2023 - 14:16 RSS:

VI4 Curation Team

Multivalent human antibody-centyrin fusion protein to prevent and treat Staphylococcus aureus infections. Buckley, P et al. in Cell Host & Mircobe, May 10, 2023
Neutrophil metabolomics in severe COVID-19 reveal GAPDH as a suppressor of neutrophil extracellular trap formation. Li Y, et al. in Nature Communications, May 5, 2023
Age-induced alterations of granulopoiesis generate atypical neutrophils that aggravate stroke pathology . Gullotta G, et al. in Nature Immunology, May 15, 2023
Infection leaves a genetic and functional mark on the gut population of a commensal bacterium. Tawk C, et al. in Cell Host & Microbe, May 10, 2023
Mirusviruses link herpesviruses to giant viruses. Gaia M, et al. in Nature, April 19, 2023

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reading list, infection, inflammation, immunology, microbiome

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Recommended Reading - June 4th, 2023

calvikn1 — Fri, 02 Jun 2023 15:44:31 +0000

Recommended Reading - June 4th, 2023 calvikn1 Fri, 06/02/2023 - 10:44 RSS:

VI4 Curation Team

Role of Caspases and Gasdermin A during HSV-1 Infection in Mice. Li L, et al. in Viruses, September 13, 2022
S+C121:C124tunning of neutrophils accounts for the anti-inflammatory effects of clodronate liposomes. Culemann S, et al. in Journal of Experimental Medicine, March 28, 2023
Profiling the human intestinal environment under physiological conditions. Shalon D, Et al. in Nature, May 10, 2023
Exogenously Scavenged and Endogenously Synthesized Heme Are Differentially Utilized by Mycobacterium tuberculosis. Donegan R, et al. in Microbiology Spectrum, September 28, 2022
Spatial transcriptome uncovers rich coordination of metabolism in E. coli K12 biofilm. Wang T, et al. in Nature Chemical Biology, April 13, 2023

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reading list, microbiome, inflammation, infection

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Recommended Reading - May 8th, 2023

calvikn1 — Mon, 08 May 2023 18:30:27 +0000

Recommended Reading - May 8th, 2023 calvikn1 Mon, 05/08/2023 - 13:30 RSS:

VI4 Curation Team

Mitochondrial ROS promotes susceptibility to infection via gasdermin D-mediated necroptosis. Weindel C, et al. in Cell, August 18, 2022
CTCF mediates CD8+ effector differentiation through dynamic redistribution and genomic reorganization. Liu J, et al. in Journal of Experimental Medicine, April 23, 2023
Exploring Masses and Internal Mass Distributions of Single Carboxysomes in Free Solution Using Fluorescence and Interferometric Scattering in an Anti-Brownian Trap. Lavania A, et al. in The Journal of Physical Chemistry B, October 25, 2022
STAT3 regulates CD8+ T cell differentiation and functions in cancer and acute infection. Sun Q, et al. in Journal of Experimental Medicine, April 3, 2023
Neutrophil inflammasomes sense the subcellular delivery route of translocated bacterial effectors and toxins. Oh C, et al. in Cell Reports, November 22, 2022

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reading list, infection, immunology, Cancer immunology

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Recommended Reading - April 16th, 2023

calvikn1 — Wed, 12 Apr 2023 19:34:55 +0000

Recommended Reading - April 16th, 2023 calvikn1 Wed, 04/12/2023 - 14:34 RSS:

VI4 Curation Team

Coordination of bacterial cell wall and outer membrane biosynthesis. Hummels K, et al. in Nature, March 1, 2023
Immune landscape in invasive ductal and lobular breast cancer reveals a divergent macrophage-driven microenvironment. Onkar S, et al. in Nature Cancer, March 16, 2023
SARS-CoV-2 Omicron (B.1.1.529) shows minimal neurotropism in a double-humanized mouse model. Alves, RPdS et al. in Antiviral Research, April 1, 2023
Glycogen Metabolism in Candida albicans Impacts Fitness and Virulence during Vulvovaginal and Invasive Candidiasis. Miao, J et al. in mBio, February 22, 2023
GPX4 regulates cellular necrosis and host resistance in Mycobacterium tuberculosis infection. Amaral E, et al. in Journal of Experimental Medicine, September 7, 2022

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reading list, infection, Cancer immunology, microbiome

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Recommended Reading - March 5th, 2023

calvikn1 — Mon, 06 Mar 2023 16:39:01 +0000

Recommended Reading - March 5th, 2023 calvikn1 Mon, 03/06/2023 - 10:39 RSS:

VI4 Curation Team

CD8+ T cell activation in cancer comprises an initial activation phase in lymph nodes followed by effector differentiation within the tumor. Prokhnevska N, et al. in Immunity, December 21, 2022
Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states. Ma P, et al. in Cell, February 16, 2023
Influenza A virus undergoes compartmentalized replication in vivo dominated by stochastic bottlenecks. Amato K, et al. in Nature Communications, June 14, 2022
The maternal prenatal and offspring early-life gut microbiome of childhood asthma phenotypes. Lee-Sarwar K, et al. in Allergy, September 15, 2022
A cytoskeletal vortex drives phage nucleus rotation during jumbo phage replication in E. coli. Birkholz E, et al. in Cell Reports, August 16, 2022

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reading list, Cancer immunology, microbiome, infection

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Recommended Reading - February 5th, 2023

calvikn1 — Mon, 06 Feb 2023 20:29:54 +0000

Recommended Reading - February 5th, 2023 calvikn1 Mon, 02/06/2023 - 14:29 RSS:

VI4 Curation Team

Past history of obesity triggers persistent epigenetic changes in innate immunity and exacerbates neuroinflammation. Hata M, et al. in Science, January 6, 2023
Functional T cells are capable of supernumerary cell division and longevity. Soerens A, et al. in Nature, December 5, 2022
Chlamydia repurposes the actin-binding protein EPS8 to disassemble epithelial tight junctions and promote infection. Dolat L, et al. in Cell Host & Microbe, December 14, 2022
Gut colonization by Proteobacteria alters host metabolism and modulates cocaine neurobehavioral responses. Cuesta S, et al. in Cell Host & Microbe, November 9, 2022
Fetal and maternal NLRP3 signaling is required for preterm labor and birth. Motomura K, et al. in The Journal of Clinical Investigation Insights, August 22, 2022

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reading list, inflammation, Cancer immunology, infection, microbiome, immunology

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Recommended Reading - January 15th, 2023

calvikn1 — Mon, 09 Jan 2023 21:39:49 +0000

Recommended Reading - January 15th, 2023 calvikn1 Mon, 01/09/2023 - 15:39 RSS:

VI4 Curation Team

Anti-CD19 CAR T cell therapy for refractory systemic lupus erythematosus. Mackensen A, et al. in Nature Medicine, September 15, 2022
Transcriptional atlas of the human immune response to 13 vaccines reveals a common predictor of vaccine-induced antibody responses. Hagan T, et al. in Nature Immunology, October 21, 2022
Engineered cell entry links receptor biology with single-cell genomics. Yu B, et al. in Cell, December 22, 2022
Mycobiota and diet-derived fungal xenosiderophores promote Salmonella gastrointestinal colonization. Santus W, et al. in Nature Microbiology, November 21, 2022
Epithelial HNF4A shapes the intraepithelial lymphocyte compartment via direct regulation of immune signaling molecules. Lei X, et al. in Journal of Experimental Medicine, July 6, 2022

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reading list, inflammation, infection, microbiome, immunology

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Recommended Reading - December 11, 2022

calvikn1 — Sun, 11 Dec 2022 20:14:12 +0000

Recommended Reading - December 11, 2022 calvikn1 Sun, 12/11/2022 - 14:14 RSS:

VI4 Curation Team

Lymphatic migration of unconventional T cells promotes site-specific immunity in distinct lymph nodes. Ataide M, et al. in Immunity, October 11, 2022
Gut bacterial nutrient preferences quantified in vivo. Zeng X, et al. in Cell Reports, September 1, 2022
Protein Kinase CK2 Controls CD8+ T Cell Effector and Memory Function during Infection. Yang W, et al. in The Journal of Immunology, September 1, 2022
Design, construction, and in vivo augmentation of a complex gut microbiome. Cheng A, et al in Cell, September 15, 2022
Actin cytoskeleton remodeling primes RIG-I-like receptor activation. Acharya D, et al. in Cell, September 15, 2022

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reading list, Cancer immunology, microbiome, infection

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Recommended Reading - November 6th, 2022

calvikn1 — Sun, 06 Nov 2022 20:13:37 +0000

Recommended Reading - November 6th, 2022 calvikn1 Sun, 11/06/2022 - 14:13 RSS:

VI4 Curation Team

TCF-1 promotes chromatin interactions across topologically associating domains in T cell progenitors. Wang W, et al. in Nature Immunology, June 20, 2022
Induced pluripotent stem cells display a distinct set of MHC I-associated peptides shared by human cancers. Aavaloaei A, et al. in Cell Reports, August 16, 2022
Evolution of immune genes is associated with the Black Death. Klunk J, et al. in Nature, October 19, 2022
Neutrophil Recruitment in Pneumococcal Pneumonia. Palmer C & Kimmey J in Frontiers in Cellular and Infection Microbiology, May 13, 2022
A dissemination-prone morphotype enhances extrapulmonary organ entry by Cryptococcus neoformans. Denham S, et al. in Cell Host & Microbe, September 12, 2022

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reading list, Cancer immunology, infection, microbiome

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Recommended Reading - October 16, 2022

calvikn1 — Mon, 17 Oct 2022 22:23:01 +0000

Recommended Reading - October 16, 2022 calvikn1 Mon, 10/17/2022 - 17:23 RSS:

VI4 Curation Team

Single-cell analysis identifies the interaction of altered renal tubules with basophils orchestrating kidney fibrosis. Doke T, et al. in Nature Immunology, May 12, 2022
The metastatic spread of breast cancer accelerates during sleep. Diamantopoulou Z, et al. in Nature, June 22, 2022
A family of unusual immunoglobulin superfamily genes in an invertebrate histocompatibility complex. Heune A, et al. in PNAS, September 26, 2022
Innate type 2 immunity controls hair follicle commensalism by Demodex mites. Ricardo-Gonzalez R, et al. in Cell Immunity, August 30, 2022
Regulation of Klebsiella pneumoniae mucoidy by the bacterial tyrosine kinase Wzc. Khadka S, et al. in bioRxiv, June 5, 2022

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reading list, inflammation, Cancer immunology, immunology, infection, microbiome

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Recommended Reading - September 4, 2022

calvikn1 — Thu, 01 Sep 2022 18:33:42 +0000

Recommended Reading - September 4, 2022 calvikn1 Thu, 09/01/2022 - 13:33 RSS:

VI4 Curation Team

BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection. Cao Y, et al. in Nature, June 17, 2022
pH sensing controls tissue inflammation by modulating cellular metabolism and endo-lysosomal function of immune cells. Chen X, et al. in Nature Immunology, June 6, 2022
Neuropilin-1 is present on Foxp3+ T regulatory cell-derived small extracellular vesicles and mediates immunity against skin transplantation. Campos-Mora M, et al. in Journal of Extracellular Vesicles, June 8, 2022
Patterns and Predictors of Failure in Recurrent or Refractory Large B-Cell Lymphomas After Chimeric Antigen Receptor T-Cell Therapy. Figura N, et al. in International Journal of Radiation Oncology*Biology*Physics, December 1, 2021
Global, distinctive, and personal changes in molecular and microbial profiles by specific fibers in humans. Lancaster S, et al. in Cell Host & Microbe, April 27, 2022

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reading list, infection, inflammation, immunology, Cancer immunology, microbiome

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Recommended Reading - August 7th, 2022

calvikn1 — Sun, 07 Aug 2022 20:00:55 +0000

Recommended Reading - August 7th, 2022 calvikn1 Sun, 08/07/2022 - 15:00 RSS:

VI4 Curation Team

Autoreactive CD8+ T cells are restrained by an exhaustion-like program that is maintained by LAG3. Grebinoski S, et al. in Nature Immunology, May 26, 2022
Mapping the developing human immune system across organs. Suo C, et al. in Science, June 7, 2022
Pregnancy enables antibody protection against intracellular infection. Erickson J, et al. in Nature, June 8, 2022
Intestinal microbiota signatures of clinical response and immune-related adverse events in melanoma patients treated with anti-PD-1. McCulloch J, et al. in Nature Medicine, February 28, 2022
Tissue remodeling by an opportunistic pathogen triggers allergic inflammation. Agaronyan K, et al. in Immunity, May 10, 2022

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Cancer immunology, immunology, infection, microbiome, inflammation

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Recommended Reading - July 10th, 2022

calvikn1 — Sun, 10 Jul 2022 18:46:25 +0000

Recommended Reading - July 10th, 2022 calvikn1 Sun, 07/10/2022 - 13:46 RSS:

VI4 Curation Team

Multivalent designed proteins neutralize SARS-CoV-2 variants of concern and confer protection against infection in mice. Hunt A, et al. in Science Translational Medicine, April 12, 2022
Intramuscular AZD7442 (Tixagevimab– Cilgavimab) for Prevention of Covid-19. Levin MJ, et al. in The New England Journal of Medicine, April 20, 2022
Neoantigen quality predicts immunoediting in survivors of pancreatic cancer. Luksza M, et al. in Nature, May 19, 2022
Host hepatic metabolism is modulated by gut microbiota-derived sphingolipids. Le HH, et al. in Cell Host & Microbe, June 8, 2022
Extracellular vesicles from lung tissue drive bone marrow neutrophil recruitment in inflammation. Liu B, et al. in Journal of Extracellular Vesicles, May 20, 2022

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reading list, infection, Cancer immunology, microbiome, inflammation

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