Publications

2023 Publications

Improving Lung Cancer Diagnosis with Computed Tomography Radiomics and Serum Histoplasmosis Testing. Marmor HN, Deppen SA, Welty V, Kammer MN, Godfrey CM, Patel K, Maldonado F, Chen H, Starnes SL, Wilson DO, Billatos E, Grogan EL. Cancer Epidemiol Biomarkers Prev. 2023 Mar 6;32(3):329-336. doi: 10.1158/1055-9965.EPI-22-0532. PMID: 36535650

 

Evidence of Novel Susceptibility Variants for Prostate Cancer and a Multiancestry Polygenic Risk Score Associated with Aggressive Disease in Men of African Ancestry. Chen F, Madduri RK, Rodriguez AA, Darst BF, Chou A, Sheng X, Wang A, Shen J, Saunders EJ, Rhie SK, Bensen JT, Ingles SA, Kittles RA, Strom SS, Rybicki BA, Nemesure B, Isaacs WB, Stanford JL, Zheng W, Sanderson M, John EM, Park JY, Xu J, Wang Y, Berndt SI, Huff CD, Yeboah ED, Tettey Y, Lachance J, Tang W, Rentsch CT, Cho K, Mcmahon BH, Biritwum RB, Adjei AA, Tay E, Truelove A, Niwa S, Sellers TA, Yamoah K, Murphy AB, Crawford DC, Patel AV, Bush WS, Aldrich MC, Cussenot O, Petrovics G, Cullen J, Neslund-Dudas CM, Stern MC, Kote-Jarai Z, Govindasami K, Cook MB, Chokkalingam AP, Hsing AW, Goodman PJ, Hoffmann TJ, Drake BF, Hu JJ, Keaton JM, Hellwege JN, Clark PE, Jalloh M, Gueye SM, Niang L, Ogunbiyi O, Idowu MO, Popoola O, Adebiyi AO, Aisuodionoe-Shadrach OI, Ajibola HO, Jamda MA, Oluwole OP, Nwegbu M, Adusei B, Mante S, Darkwa-Abrahams A, Mensah JE, Diop H, Van Den Eeden SK, Blanchet P, Fowke JH, Casey G, Hennis AJ, Lubwama A, Thompson IM Jr, Leach R, Easton DF, Preuss MH, Loos RJ, Gundell SM, Wan P, Mohler JL, Fontham ET, Smith GJ, Taylor JA, Srivastava S, Eeles RA, Carpten JD, Kibel AS, Multigner L, Parent MÉ, Menegaux F, Cancel-Tassin G, Klein EA, Andrews C, Rebbeck TR, Brureau L, Ambs S, Edwards TL, Watya S, Chanock SJ, Witte JS, Blot WJ, Michael Gaziano J, Justice AC, Conti DV, Haiman CA. Eur Urol. 2023 Feb 27:S0302-2838(23)02561-7. doi: 10.1016/j.eururo.2023.01.022. Online ahead of print. PMID: 36872133

Posttranslational modifications induce autoantibodies with risk prediction capability in patients with small cell lung cancer. Lastwika KJ, Kunihiro A, Solan JL, Zhang Y, Taverne LR, Shelley D, Rho JH, Randolph TW, Li CI, Grogan EL, Massion PP, Fitzpatrick AL, MacPherson D, Houghton AM, Lampe PD. Sci Transl Med. 2023 Jan 11;15(678):eadd8469. doi: 10.1126/scitranslmed.add8469. Epub 2023 Jan 11. PMID: 36630482

 

Assessing patient-level knowledge of precision medicine in a community health center setting. Stallings SC, Richmond J, Canedo JR, Beard K, Bonnet K, Schlundt DG, Wilkins CH, Aldrich MC. J Community Genet. 2023 Jan 7. doi: 10.1007/s12687-023-00632-4. Online ahead of print. PMID: 36609637

Life-threatening Mediastinitis Following Endobronchial Ultrasound-guided Transbronchial Needle Aspiration of Mediastinal Granulomas: A Case Series. Landeen CA, Pannu JK, Maldonado F, Rickman OB, Grogan EL, Lambright ES, DePew ZS, Lentz RJ. J Bronchology Interv Pulmonol. 2023 Jan 1;30(1):66-69. doi: 10.1097/LBR.0000000000000884. PMID: 35969008

Design and methodological considerations for biomarker discovery and validation in the Integrative Analysis of Lung Cancer Etiology and Risk (INTEGRAL) Program. Robbins HA, Alcala K, Moez EK, Guida F, Thomas S, Zahed H, Warkentin MT, Smith-Byrne K, Brhane Y, Muller D, Feng X, Albanes D, Aldrich MC, Arslan AA, Bassett J, Berg CD, Cai Q, Chen C, Davies MPA, Diergaarde B, Field JK, Freedman ND, Huang WY, Johansson M, Jones M, Koh WP, Lam S, Lan Q, Langhammer A, Liao LM, Liu G, Malekzadeh R, Milne RL, Montuenga LM, Rohan T, Sesso HD, Severi G, Sheikh M, Sinha R, Shu XO, Stevens VL, Tammemägi MC, Tinker LF, Visvanathan K, Wang Y, Wang R, Weinstein SJ, White E, Wilson D, Yuan JM, Zhang X, Zheng W, Amos CI, Brennan P, Johansson M, Hung RJ. Ann Epidemiol. 2023 Jan;77:1-12. doi: 10.1016/j.annepidem.2022.10.014. Epub 2022 Oct 29. PMID: 36404465 PMCID: PMC9835888

2022 Publications

Improving lung cancer diagnosis with cancer, fungal, and imaging biomarkers. Marmor HN, Kammer MN, Deppen SA, Shipe M, Welty VF, Patel K, Godfrey C, Billatos E, Herman JG, Wilson DO, Kussrow AK, Bornhop DJ, Maldonado F, Chen H, Grogan EL. J Thorac Cardiovasc Surg. 2022 Dec 23:S0022-5223(22)01354-X. doi: 10.1016/j.jtcvs.2022.12.014. Online ahead of print. PMID: 36792410

Commentary: Encouraging reduction in postoperative complications with minimally invasive esophagectomies: Prompting further granular investigation. Xiao D, Grogan E. J Thorac Cardiovasc Surg. 2022 Dec 22:S0022-5223(22)01350-2. doi: 10.1016/j.jtcvs.2022.12.012. Online ahead of print. PMID: 36681557

Measurement of provider fidelity to immunization guidelines: a mixed-methods study on the feasibility of documenting patient refusals of the human papillomavirus vaccine. Chang RS, Shing JZ, Erves JC, Du L, Koyama T, Deppen S, Rentuza AB, McAfee C, Stroebel C, Cates J, Harnack L, Andrews D, Bramblett R, Hull PC. BMC Med Inform Decis Mak. 2022 Dec 22;22(1):339. doi: 10.1186/s12911-022-02083-2. PMID: 36550466 PMCID: PMC9783975

Racial Disparities in Lung Cancer Stage of Diagnosis among Adults Living in the Southeastern U.S. Richmond J, Murray MH, Milder CM, Blume JD, Aldrich MC. Chest. 2022 Nov 23:S0012-3692(22)04195-2. doi: 10.1016/j.chest.2022.11.025. Online ahead of print. PMID: 36435265

 

Associations of Dietary Intakes of Carotenoids and Vitamin A with Lung Cancer Risk in a Low-Income Population in the Southeastern United States. Sun Y, Wu J, Yoon HS, Buchowski MS, Cai H, Deppen SA, Steinwandel MD, Zheng W, Shu XO, Blot WJ, Cai Q. Cancers (Basel). 2022 Oct 21;14(20):5159. doi: 10.3390/cancers14205159. PMID: 36291941 PMCID: PMC9600198

 

Deep Breaths: A Systematic Review of the Potential Effects of Employment in the Nuclear Industry on Mortality from Non-Malignant Respiratory Disease. Milder CM, Howard SC, Ellis ED, Deppen SA. Radiat Res. 2022 Oct 1;198(4):396-429. doi: 10.1667/RADE-21-00014.1.2022 2022. PMID: 35943867

 

The Association of Healthcare System Resources with Lung Cancer Screening Implementation: A Cohort Study. Lewis JA, Samuels LR, Denton J, Matheny ME, Maiga A, Slatore CG, Grogan E, Kim J, Sherrier RH, Dittus RS, Massion PP, Keohane L, Roumie CL, Nikpay S. Chest. Sep;162(3):701-711. doi: 10.1016/j.chest.2022.03.050. Epub 2022 PMID: 35413280 PMCID: PMC9529611

Psychosocial impact of COVID-19 among adults in the southeastern United States. Richmond J, Sanderson M, Shrubsole MJ, Holowatyj AN, Schlundt DG, Aldrich MC. Prev Med. 2022 Oct;163:107191. doi: 10.1016/j.ypmed.2022.107191. Epub 2022 Aug 11. PMID: 35964774 PMCID: PMC9367170

 

Reducing uncertainty in cancer risk estimation for patients with indeterminate pulmonary nodules using an integrated deep learning model. Gao R, Li T, Tang Y, Xu K, Khan M, Kammer M, Antic SL, Deppen S, Huo Y, Lasko TA, Sandler KL, Maldonado F, Landman BA. Comput Biol Med. 2022 Sep 29; 150:106113. doi: 10.1016/j.compbiomed.2022.106113. Online ahead of print. PMID: 36198225

The Intervention Probability Curve: Modeling the practical application of threshold-guided decision making, evaluated in Lung, Prostate, and Ovarian Cancers. Kammer MN, Rowe DJ, Deppen SA, Grogan EL, Kaizer AM, Baron AE, Maldonado F. Cancer Epidemiol Biomarkers Prev. 2022 Sep 2;31(9):1752-1759. doi: 10.1158/1055-9965.EPI-22-0190. PMID: 35732292 PMCID: PMC9491961

 

Improving malignancy risk prediction of indeterminate pulmonary nodules with imaging features and biomarkers. Marmor HN, Jackson L, Gawel S, Kammer M, Massion PP, Grogan EL, Davis GJ, Deppen SA. Clin Chim Acta. 2022 Sep 1;534:106-114. doi: 10.1016/j.cca.2022.07.010. Epub 2022 Jul 20. PMID: 35870539

 

Cross-ancestry genome-wide meta-analysis of 61,047 cases and 947,237 controls identifies new susceptibility loci contributing to lung cancer. Byun J, Han Y, Li Y, Xia J, Long E, Choi J, Xiao X, Zhu M, Zhou W, Sun R, Bossé Y, Song Z, Schwartz A, Lusk C, Rafnar T, Stefansson K, Zhang T, Zhao W, Pettit RW, Liu Y, Li X, Zhou H, Walsh KM, Gorlov I, Gorlova O, Zhu D, Rosenberg SM, Pinney S, Bailey-Wilson JE, Mandal D, de Andrade M, Gaba C, Willey JC, You M, Anderson M, Wiencke JK, Albanes D, Lam S, Tardon A, Chen C, Goodman G, Bojeson S, Brenner H, Landi MT, Chanock SJ, Johansson M, Muley T, Risch A, Wichmann HE, Bickeböller H, Christiani DC, Rennert G, Arnold S, Field JK, Shete S, Le Marchand L, Melander O, Brunnstrom H, Liu G, Andrew AS, Kiemeney LA, Shen H, Zienolddiny S, Grankvist K, Johansson M, Caporaso N, Cox A, Hong YC, Yuan JM, Lazarus P, Schabath MB, Aldrich MC, Patel A, Lan Q, Rothman N, Taylor F, Kachuri L, Witte JS, Sakoda LC, Spitz M, Brennan P, Lin X, McKay J, Hung RJ, Amos CI. Nat Genet. 2022 Aug;54(8):1167-1177. doi: 10.1038/s41588-022-01115-x. Epub 2022 Aug 1. PMID: 35915169

A Large-Scale Genome-Wide Gene-Gene Interaction Study of Lung Cancer Susceptibility in Europeans With a Trans-Ethnic Validation in Asians. Zhang R, Shen S, Wei Y, Zhu Y, Li Y, Chen J, Guan J, Pan Z, Wang Y, Zhu M, Xie J, Xiao X, Zhu D, Li Y, Albanes D, Landi MT, Caporaso NE, Lam S, Tardon A, Chen C, Bojesen SE, Johansson M, Risch A, Bickeböller H, Wichmann HE, Rennert G, Arnold S, Brennan P, McKay JD, Field JK, Shete SS, Le Marchand L, Liu G, Andrew AS, Kiemeney LA, Zienolddiny-Narui S, Behndig A, Johansson M, Cox A, Lazarus P, Schabath MB, Aldrich MC, Dai J, Ma H, Zhao Y, Hu Z, Hung RJ, Amos CI, Shen H, Chen F, Christiani DC. J Thorac Oncol. 2022 Aug;17(8):974-990. doi: 10.1016/ j.jtho.2022.04.011. Epub 2022 Apr 30. PMID: 35500836

Reply to Zhao et al.: Integrated Biomarkers for Indeterminate Pulmonary Nodules: Is 2-Year Imaging Follow-Up Enough for Suspected Benign Lesions? Kammer MN, Maldonado F, Deppen SA, Baron A, Grogan EL. Am J Respir Crit Care Med. 2022 Jun 15;205(12):1486. doi: 10.1164/rccm.202201-0082LE. PMID: 35373716 PMCID: PMC9875903

Minimally Invasive and Sublobar Resections for Lung Cancer. Godfrey CM, Marmor HN, Lambright ES, Grogan EL. Surg Clin North Am. 2022 Jun;102(3):483-492. doi: 10.1016/j.suc.2022.01.006. PMID: 35671768

The impact of the lung EDRN-CVC on Phase 1, 2, & 3 biomarker validation studies. Kammer MN, Deppen SA, Antic S, Jamshedur Rahman SM, Eisenberg R, Maldonado F, Aldrich MC, Sandler KL, Landman B, Massion PP, Grogan EL. Cancer Biomark. 2022;33(4):449-465. doi: 10.3233/CBM-210382. PMID: 35491773

Reply to: Integrated Biomarkers for IPNs: Is Two-year Imaging Follow-up Enough for Suspected Benign Lesions? Kammer M, Maldonado F, Deppen S, Baron A, Grogan E. Am J Respir Crit Care Med. 2022 Apr 2. doi: 10.1164/rccm.202201-0082LE. Online ahead of print. PMID: 35373716

Histoplasma Empyema Appearing as a Diaphragm-Invading Colorectal Metastasis to the Liver. Wallace MW, Lyons EM, Grogan EL, Johnson J, Geevarghese SK. Am Surg. 2022 Mar 25:31348221082274. doi: 10.1177/00031348221082274. Online ahead of print. PMID: 35331019

18F-FSPG PET imaging for the evaluation of indeterminate pulmonary nodules. Paez R, Shah C, Cords AJ, Muterspaugh A, Helton JE, Antic S, Eisenberg R, Chen H, Grogan EL, Manning HC, Walker RC, Massion PP. PLoS One. 2022 Mar 16;17(3):e0265427. doi: 10.1371/journal.pone.0265427. eCollection 2022. PMID: 35294486 PMCID: PMC8926263

Beyond the AJR: Disparities in Lung Cancer Screening Adherence Persist in the Veterans Health Administration. Sandler KL, Deppen SA. AJR Am J Roentgenol. 2022 Mar 2:1. doi: 10.2214/AJR.21.26852. Online ahead of print. PMID: 35234498

 

Extending the value of routine lung screening CT with quantitative body composition assessment. Xu K, Gao R, Tang Y, Deppen SA, Sandler KL, Kammer MN, Antic SL, Maldonado F, Huo Y, Khan MS, Landman BA. Proc SPIE Int Soc Opt Eng. 2022 Feb-Mar; 12032:120321L. doi: 10.1117/12.2611784. Epub 2022 Apr 4. PMID: 36303578 PMCID: PMC9604426

Intrinsic Evaluation of Contextual and Non-contextual Word Embeddings using Radiology Reports. Khan MS, Landman BA, Deppen SA, Matheny ME. AMIA Annu Symp Proc. 2022 Feb 21;2021:631-640. eCollection 2021. PMID: 35308988 PMCID: PMC8861761

Genome-wide interaction analysis identified low-frequency variants with sex disparity in lung cancer risk. Li Y, Xiao X, Li J, Byun J, Cheng C, Bossé Y, McKay J, Albanes D, Lam S, Tardon A, Chen C, Bojesen SE, Landi MT, Johansson M, Risch A, Bickeböller H, Wichmann HE, Christiani DC, Rennert G, Arnold S, Goodman G, Field JK, Davies MPA, Shete SS, Le Marchand L, Melander O, Brunnström H, Liu G, Hung RJ, Andrew AS, Kiemeney LA, Shen H, Sun R, Zienolddiny S, Grankvist K, Johansson M, Caporaso N, Teare DM, Hong YC, Lazarus P, Schabath MB, Aldrich MC, Schwartz AG, Gorlov I, Purrington K, Yang P, Liu Y, Han Y, Bailey-Wilson JE, Pinney SM, Mandal D, Willey JC, Gaba C, Brennan P, Amos CI; INTEGRAL-ILCCO lung cancer consortium. Hum Mol Genet. 2022 Feb 9:ddac030. doi: 10.1093/hmg/ddac030. Online ahead of print. PMID: 35138370

Gene-gene interaction of AhRwith and within the Wntcascade affects susceptibility to lung cancer.Rosenberger A, Muttray N, Hung RJ, Christiani DC, Caporaso NE, Liu G, Bojesen SE, Le Marchand L, Albanes D, Aldrich MC, Tardon A, Fernández-Tardón G, Rennert G, Field JK, Davies MPA, Liloglou T, Kiemeney LA, Lazarus P, Wendel B, Haugen A, Zienolddiny S, Lam S, Schabath MB, Andrew AS, Duell EJ, Arnold SM, Goodman GE, Chen C, Doherty JA, Taylor F, Cox A, Woll PJ, Risch A, Muley TR, Johansson M, Brennan P, Landi MT, Shete SS, Amos CI, Bickeböller H; INTEGRAL-ILCCO Consortium. Eur J Med Res. 2022 Jan 31;27(1):14. doi: 10.1186/s40001-022-00638-7. PMID: 35101137 PMCID: PMC8805279

Iam hiQ-a novel pair of accuracy indices for imputed genotypes. Rosenberger A, Tozzi V, Bickeböller H; INTEGRAL-ILCCO consortium*. BMC Bioinformatics. 2022 Jan 24;23(1):50. doi: 10.1186/s12859-022-04568-3. PMID: 35073846 PMCID: PMC8785528 *Aldrich MC

A Rare Germline HOXB13 Variant Contributes to Risk of Prostate Cancer in Men of African Ancestry.Darst BF, Hughley R, Pfennig A, Hazra U, Fan C, Wan P, Sheng X, Xia L, Andrews C, Chen F, Berndt SI, Kote-Jarai Z, Govindasami K, Bensen JT, Ingles SA, Rybicki BA, Nemesure B, John EM, Fowke JH, Huff CD, Strom SS, Isaacs WB, Park JY, Zheng W, Ostrander EA, Walsh PC, Carpten J, Sellers TA, Yamoah K, Murphy AB, Sanderson M, Crawford DC, Gapstur SM, Bush WS, Aldrich MC, Cussenot O, Petrovics G, Cullen J, Neslund-Dudas C, Kittles RA, Xu J, Stern MC, Chokkalingam AP, Multigner L, Parent ME, Menegaux F, Cancel-Tassin G, Kibel AS, Klein EA, Goodman PJ, Stanford JL, Drake BF, Hu JJ, Clark PE, Blanchet P, Casey G, Hennis AJM, Lubwama A, Thompson IM Jr, Leach RJ, Gundell SM, Pooler L, Mohler JL, Fontham ETH, Smith GJ, Taylor JA, Brureau L, Blot WJ, Biritwum R, Tay E, Truelove A, Niwa S, Tettey Y, Varma R, McKean-Cowdin R, Torres M, Jalloh M, Magueye Gueye S, Niang L, Ogunbiyi O, Oladimeji Idowu M, Popoola O, Adebiyi AO, Aisuodionoe-Shadrach OI, Nwegbu M, Adusei B, Mante S, Darkwa-Abrahams A, Yeboah ED, Mensah JE, Anthony Adjei A, Diop H, Cook MB, Chanock SJ, Watya S, Eeles RA, Chiang CWK, Lachance J, Rebbeck TR, Conti DV, Haiman CA. Eur Urol. 2022 Jan 11:S0302-2838(21)02271-5. doi: 10.1016/j.eururo.2021.12.023. Online ahead of print. PMID: 35031163

 

Clinical insights into pulmonary hypertension in chronic obstructive pulmonary disease. Cook DP, Xu M, Martucci VL, Annis JS, Aldrich MC, Hemnes AR, Brittain EL. Pulm Circ. 2022 Jan 3;12(1):e12006. doi: 10.1002/pul2.12006. eCollection 2022 Jan. PMID: 35506103 PMCID: PMC9052979

 

2021 Publications

Inclusion of Smoking Data in Cardiovascular Disease Risk Estimation. Duncan MS, Greevy RA, Tindle HA, Vasan RS, Lipworth L, Aldrich MC, Lloyd-Jones DM, Freiberg MS. JAMA Cardiol. 2021 Dec 8:e214990. doi: 10.1001/jamacardio.2021.4990. Online ahead of print. PMID: 34878493 PMCID: PMC8655664

 

Integrated Biomarkers for the Management of Indeterminate Pulmonary Nodules. Kammer MN, Lakhani DA, Balar AB, Antic SL, Kussrow AK, Webster RL, Mahapatra S, Barad U, Shah C, Atwater T, Diergaarde B, Qian J, Kaizer A, New M, Hirsch E, Feser WJ, Strong J, Rioth M, Miller Y, Balagurunathan Y, Rowe DJ, Helmey S, Chen SC, Bauza J, Deppen SA, Sandler K, Maldonado F, Spira A, Billatos E, Schabath MB, Gillies RJ, Wilson DO, Walker RC, Landman B, Chen H, Grogan EL, Barón AE, Bornhop DJ, Massion PP. Am J Respir Crit Care Med. 2021 Dec 1;204(11):1306-1316. doi: 10.1164/rccm.202012-4438OC. PMID: 34464235

Cost-Effectiveness Analysis of Fibrinolysis versus Thoracoscopic Decortication for Early Empyema. Shipe ME, Maiga AW, Deppen SA, Haddad DN, Gillaspie EA, Maldonado F, Kozower BD, Grogan EL. Ann Thorac Surg. 2021 Nov;112(5):1632-1638. doi: 10.1016/j.athoracsur.2020.11.005. Epub 2020 Nov 27.  PMID: 33253674 PMCID: PMC8155089

Cancer Risk Estimation Combining Lung Screening CT with Clinical Data Elements. Gao R, Tang Y, Khan MS, Xu K, Paulson AB, Sullivan S, Huo Y, Deppen S, Massion PP, Sandler KL, Landman BA. Radiol Artif Intell. 2021 Oct 13;3(6):e210032. doi: 10.1148/ryai.2021210032. eCollection 2021 Nov. PMID: 34870220 PMCID: PMC8637232

Modeling the impact of delaying surgery for early esophageal cancer in the era of COVID-19. Shipe ME, Baechle JJ, Deppen SA, Gillaspie EA, Grogan EL. Surg Endosc. 2021 Nov;35(11):6081-6088. doi: 10.1007/s00464-020-08101-6. Epub 2020 Nov 2. PMID: 33140152 PMCID: PMC7605488

Development and Characterization of a Chest CT Atlas. Xu K, Gao R, Khan MS, Bao S, Tang Y, Deppen SA, Huo Y, Sandler KL, Massion PP, Heinrich MP, Landman BA. Proc SPIE Int Soc Opt Eng. 2021;2021:15961G. doi: 10.1117/12.2580800. Epub 2021 Feb 15. PMID: 34531633 PMCID: PMC8442827

Disruption of medical care among individuals in the southeastern United States during the COVID-19 pandemic. Ni B, Gettler E, Stern R, Munro HM, Steinwandel M, Aldrich MC, Friedman DL, Sanderson M, Schlundt D, Aronoff DM, Gupta DK, Shrubsole MJ, Lipworth L. J Public Health Res. 2021 Sep 24. doi: 10.4081/jphr.2021.2497. Online ahead of print. PMID: 34558253

Immunotherapy-mediated thyroid dysfunction: genetic risk and impact on outcomes with PD-1 blockade in non-small cell lung cancer. Luo J, Martucci VL, Quandt Z, Groha S, Murray MH, Lovly CM, Rizvi H, Egger JV, Plodkowski AJ, Abu-Akeel M, Schulze I, Merghoub T, Cardenas E, Huntsman S, Li M, Hu D, Gubens MA, Gusev A, Aldrich MC, Hellmann MD, Ziv E. Clin Cancer Res. 2021 Sep 15;27(18):5131-5140. doi: 10.1158/1078-0432.CCR-21-0921. Epub 2021 Jul 8.  PMID: 34244291

Modeling the Impact of Delaying TAVR for the Treatment of Aortic Stenosis in the Era of COVID-19.Freno DR, Shipe ME, Levack MM, Shah AS, Deppen SA, O'Leary JM, Grogan EL. JTCVS Open. 2021 Sep;7:63-71. doi: 10.1016/j.xjon.2021.06.006. Epub 2021 Jun 8. PMID: 34124697 PMCID: PMC8184875

Integrated Biomarkers for the Management of Indeterminate Pulmonary Nodules. Kammer MN, Lakhani DA, Balar AB, Antic SL, Kussrow AK, Webster RL, Mahapatra S, Barad U, Shah C, Atwater T, Diergaarde B, Qian J, Kaizer A, New M, Hirsch E, Feser WJ, Strong J, Rioth M, Miller Y, Balagurunathan Y, Rowe DJ, Helmey S, Chen SC, Bauza J, Deppen SA, Sandler K, Maldonado F, Spira A, Billatos E, Schabath MB, Gillies RJ, Wilson DO, Walker RC, Landman B, Chen H, Grogan EL, Barón AE, Bornhop DJ, Massion PP. Am J Respir Crit Care Med. 2021 Aug 31. doi: 10.1164/rccm.202012-4438OC. Online ahead of print. PMID: 34464235

Genetic landscape of Gullah African Americans. Zimmerman KD, Schurr TG, Chen WM, Nayak U, Mychaleckyj JC, Queen Quet, Moultrie LH, Divers J, Keene KL, Kamen DL, Gilkeson GS, Hunt KJ, Spruill IJ, Fernandes JK, Aldrich MC, Reich D, Garvey WT, Langefeld CD, Sale MM, Ramos PS. Am J Phys Anthropol.. 2021 Aug;175(4):905-919. doi: 10.1002/ajpa.24333. Epub 2021 May 19. PMID: 34008864 PMCID: PMC8286328

 

Establishing a Cohort and a Biorepository to Identify Biomarkers for Early Detection of Lung Cancer: The Nashville Lung Cancer Screening Cohort.  Lakhani DA, Chen SC, Antic S, Muterspaugh A, Cook C, Liu N, Shujat H, Jouan S, Winston B, Fields K, Wenstrup J, Block SL, Hinton A, Miller A, Atmajoana S, Helton JT, Patel K, Balar AB, Brewer K, Nag S, Singh R, Disher A, Huerta L, Fremont R, Rickman O, Chen H, Eisenberg R, Sandler KL, Paulson A, Walker RC, Shah C, Smith GT, Landman B, Deppen S, Grogan EL, Aldrich MC, Massion PP. Ann Am Thorac Soc. 2021 Jul;18(7):1227-1234. doi: 10.1513/ AnnalsATS.202004-344OC. PMID: 33400907 PMCID: PMC8328369

Modeling the Impact of Delaying the Diagnosis of Non-Small Cell Lung Cancer during COVID-19. Shipe ME, Haddad DN, Deppen SA, Kozower BD, Grogan EL. Ann Thorac Surg. 2021 Jul;112(1):248-254. doi: 10.1016/j.athoracsur.2020.08.025. Epub 2020 Oct 19. PMID: 33091367 PMCID: PMC7571353

 

Performance of African-ancestry-specific polygenic hazard score varies according to local ancestry in 8q24. Karunamuni RA, Huynh-Le MP, Fan CC, Thompson W, Lui A, Martinez ME, Rose BS, Mahal B, Eeles RA, Kote-Jarai Z, Muir K, Lophatananon A; UKGPCS Collaborators, Tangen CM, Goodman PJ, Thompson IM Jr, Blot WJ, Zheng W, Kibel AS, Drake BF, Cussenot O, Cancel-Tassin G, Menegaux F, Truong T, Park JY, Lin HY, Taylor JA, Bensen JT, Mohler JL, Fontham ETH, Multigner L, Blanchet P, Brureau L, Romana M, Leach RJ, John EM, Fowke JH, Bush WS, Aldrich MC, Crawford DC, Cullen J, Petrovics G, Parent MÉ, Hu JJ, Sanderson M; PRACTICAL Consortium, Mills IG, Andreassen OA, Dale AM, Seibert TM. Prostate Cancer Prostatic Dis. 2021 Jun 14. doi: 10.1038/s41391-021-00403-7. Online ahead of print. PMID: 34127801

Fate or coincidence: Do COPD and major depression share genetic risk factors? Martucci VL, Richmond B, Davis LK, Blackwell TS, Cox NJ, Samuels D, Edwards DV, Aldrich MC. Hum Mol Genet. 2021 May 12;30(7):619-628. doi: 10.1093/hmg/ddab068. PMID: 33704461

Women screened for breast cancer are dying from lung cancer: An opportunity to improve lung cancer screening in a mammography population. Sandler KL, Haddad DN, Paulson AB, Osterman TJ, Scott CC, Poulos EA, Deppen SA. J Med Screen. 2021 May 4:9691413211013058. doi: 10.1177/09691413211013058. Online ahead of print. PMID: 33947284

Discovery and fine-mapping of height loci via high-density imputation of GWASs in individuals of African ancestry. Graff M, Justice AE, Young KL, Marouli E, Zhang X, Fine RS, Lim E, Buchanan V, Rand K, Feitosa MF, Wojczynski MK, Yanek LR, Shao Y, Rohde R, Adeyemo AA, Aldrich MC, Allison MA, Ambrosone CB, Ambs S, Amos C, Arnett DK, Atwood L, Bandera EV, Bartz T, Becker DM, Berndt SI, Bernstein L, Bielak LF, Blot WJ, Bottinger EP, Bowden DW, Bradfield JP, Brody JA, Broeckel U, Burke G, Cade BE, Cai Q, Caporaso N, Carlson C, Carpten J, Casey G, Chanock SJ, Chen G, Chen M, Chen YI, Chen WM, Chesi A, Chiang CWK, Chu L, Coetzee GA, Conti DV, Cooper RS, Cushman M, Demerath E, Deming SL, Dimitrov L, Ding J, Diver WR, Duan Q, Evans MK, Falusi AG, Faul JD, Fornage M, Fox C, Freedman BI, Garcia M, Gillanders EM, Goodman P, Gottesman O, Grant SFA, Guo X, Hakonarson H, Haritunians T, Harris TB, Harris CC, Henderson BE, Hennis A, Hernandez DG, Hirschhorn JN, McNeill LH, Howard TD, Howard B, Hsing AW, Hsu YH, Hu JJ, Huff CD, Huo D, Ingles SA, Irvin MR, John EM, Johnson KC, Jordan JM, Kabagambe EK, Kang SJ, Kardia SL, Keating BJ, Kittles RA, Klein EA, Kolb S, Kolonel LN, Kooperberg C, Kuller L, Kutlar A, Lange L, Langefeld CD, Le Marchand L, Leonard H, Lettre G, Levin AM, Li Y, Li J, Liu Y, Liu Y, Liu S, Lohman K, Lotay V, Lu Y, Maixner W, Manson JE, McKnight B, Meng Y, Monda KL, Monroe K, Moore JH, Mosley TH, Mudgal P, Murphy AB, Nadukuru R, Nalls MA, Nathanson KL, Nayak U, N'Diaye A, Nemesure B, Neslund-Dudas C, Neuhouser ML, Nyante S, Ochs-Balcom H, Ogundiran TO, Ogunniyi A, Ojengbede O, Okut H, Olopade OI, Olshan A, Padhukasahasram B, Palmer J, Palmer CD, Palmer ND, Papanicolaou G, Patel SR, Pettaway CA, Peyser PA, Press MF, Rao DC, Rasmussen-Torvik LJ, Redline S, Reiner AP, Rhie SK, Rodriguez-Gil JL, Rotimi CN, Rotter JI, Ruiz-Narvaez EA, Rybicki BA, Salako B, Sale MM, Sanderson M, Schadt E, Schreiner PJ, Schurmann C, Schwartz AG, Shriner DA, Signorello LB, Singleton AB, Siscovick DS, Smith JA, Smith S, Speliotes E, Spitz M, Stanford JL, Stevens VL, Stram A, Strom SS, Sucheston L, Sun YV, Tajuddin SM, Taylor H, Taylor K, Tayo BO, Thun MJ, Tucker MA, Vaidya D, Van Den Berg DJ, Vedantam S, Vitolins M, Wang Z, Ware EB, Wassertheil-Smoller S, Weir DR, Wiencke JK, Williams SM, Williams LK, Wilson JG, Witte JS, Wrensch M, Wu X, Yao J, Zakai N, Zanetti K, Zemel BS, Zhao W, Zhao JH, Zheng W, Zhi D, Zhou J, Zhu X, Ziegler RG, Zmuda J, Zonderman AB, Psaty BM, Borecki IB, Cupples LA, Liu CT, Haiman CA, Loos R, Ng MCY, North KE. Am J Hum Genet. 2021 Apr 1;108(4):564-582. doi: 10.1016/j.ajhg.2021.02.011. Epub 2021 Mar 12. PMID: 33713608

Preparing for Bundled Payments: Impact of Complications Post-Coronary Artery Bypass Grafting on Costs. Haddad DN, Shipe ME, Absi TS, Danter MR, Vyas R, Levack M, Shah AS, Grogan EL, Balsara KR. Ann Thorac Surg. 2021 Apr;111(4):1258-1263. doi: 10.1016/ j.athoracsur.2020.06.105. Epub 2020 Sep 5. PMID: 32896546

Comprehensive functional annotation of susceptibility variants identifies genetic heterogeneity between lung adenocarcinoma and squamous cell carcinoma. Qin N, Li Y, Wang C, Zhu M, Dai J, Hong T, Albanes D, Lam S, Tardon A, Chen C, Goodman G, Bojesen SE, Landi MT, Johansson M, Risch A, Wichmann HE, Bickeboller H, Rennert G, Arnold S, Brennan P, Field JK, Shete S, Le Marchand L, Melander O, Brunnstrom H, Liu G, Hung RJ, Andrew A, Kiemeney LA, Zienolddiny S, Grankvist K, Johansson M, Caporaso N, Woll P, Lazarus P, Schabath MB, Aldrich MC, Stevens VL, Jin G, Christiani DC, Hu Z, Amos CI, Ma H, Shen H. Front Med. 2021 Apr;15(2):275-291. doi: 10.1007/s11684-020-0779-4. Epub 2020 Sep 5. PMID: 32889700

Causal relationships between body mass index, smoking and lung cancer: Univariable and multivariable Mendelian randomization. Zhou W, Liu G, Hung RJ, Haycock PC, Aldrich MC, Andrew AS, Arnold SM, Bickeböller H, Bojesen SE, Brennan P, Brunnström H, Melander O, Caporaso NE, Landi MT, Chen C, Goodman GE, Christiani DC, Cox A, Field JK, Johansson M, Kiemeney LA, Lam S, Lazarus P, Le Marchand L, Rennert G, Risch A, Schabath MB, Shete SS, Tardón A, Zienolddiny S, Shen H, Amos CI. Int J Cancer. 2021 Mar 1;148(5):1077-1086. doi: 10.1002/ijc.33292. Epub 2020 Sep 23. PMID: 32914876

Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction. Conti DV, Darst BF, Moss LC, Saunders EJ, Sheng X, Chou A, Schumacher FR, Olama AAA, Benlloch S, Dadaev T, Brook MN, Sahimi A, Hoffmann TJ, Takahashi A, Matsuda K, Momozawa Y, Fujita M, Muir K, Lophatananon A, Wan P, Le Marchand L, Wilkens LR, Stevens VL, Gapstur SM, Carter BD, Schleutker J, Tammela TLJ, Sipeky C, Auvinen A, Giles GG, Southey MC, MacInnis RJ, Cybulski C, Wokołorczyk D, Lubiński J, Neal DE, Donovan JL, Hamdy FC, Martin RM, Nordestgaard BG, Nielsen SF, Weischer M, Bojesen SE, Røder MA, Iversen P, Batra J, Chambers S, Moya L, Horvath L, Clements JA, Tilley W, Risbridger GP, Gronberg H, Aly M, Szulkin R, Eklund M, Nordström T, Pashayan N, Dunning AM, Ghoussaini M, Travis RC, Key TJ, Riboli E, Park JY, Sellers TA, Lin HY, Albanes D, Weinstein SJ, Mucci LA, Giovannucci E, Lindstrom S, Kraft P, Hunter DJ, Penney KL, Turman C, Tangen CM, Goodman PJ, Thompson IM Jr, Hamilton RJ, Fleshner NE, Finelli A, Parent MÉ, Stanford JL, Ostrander EA, Geybels MS, Koutros S, Freeman LEB, Stampfer M, Wolk A, Håkansson N, Andriole GL, Hoover RN, Machiela MJ, Sørensen KD, Borre M, Blot WJ, Zheng W, Yeboah ED, Mensah JE, Lu YJ, Zhang HW, Feng N, Mao X, Wu Y, Zhao SC, Sun Z, Thibodeau SN, McDonnell SK, Schaid DJ, West CML, Burnet N, Barnett G, Maier C, Schnoeller T, Luedeke M, Kibel AS, Drake BF, Cussenot O, Cancel-Tassin G, Menegaux F, Truong T, Koudou YA, John EM, Grindedal EM, Maehle L, Khaw KT, Ingles SA, Stern MC, Vega A, Gómez-Caamaño A, Fachal L, Rosenstein BS, Kerns SL, Ostrer H, Teixeira MR, Paulo P, Brandão A, Watya S, Lubwama A, Bensen JT, Fontham ETH, Mohler J, Taylor JA, Kogevinas M, Llorca J, Castaño-Vinyals G, Cannon-Albright L, Teerlink CC, Huff CD, Strom SS, Multigner L, Blanchet P, Brureau L, Kaneva R, Slavov C, Mitev V, Leach RJ, Weaver B, Brenner H, Cuk K, Holleczek B, Saum KU, Klein EA, Hsing AW, Kittles RA, Murphy AB, Logothetis CJ, Kim J, Neuhausen SL, Steele L, Ding YC, Isaacs WB, Nemesure B, Hennis AJM, Carpten J, Pandha H, Michael A, De Ruyck K, De Meerleer G, Ost P, Xu J, Razack A, Lim J, Teo SH, Newcomb LF, Lin DW, Fowke JH, Neslund-Dudas C, Rybicki BA, Gamulin M, Lessel D, Kulis T, Usmani N, Singhal S, Parliament M, Claessens F, Joniau S, Van den Broeck T, Gago-Dominguez M, Castelao JE, Martinez ME, Larkin S, Townsend PA, Aukim-Hastie C, Bush WS, Aldrich MC, Crawford DC, Srivastava S, Cullen JC, Petrovics G, Casey G, Roobol MJ, Jenster G, van Schaik RHN, Hu JJ, Sanderson M, Varma R, McKean-Cowdin R, Torres M, Mancuso N, Berndt SI, Van Den Eeden SK, Easton DF, Chanock SJ, Cook MB, Wiklund F, Nakagawa H, Witte JS, Eeles RA, Kote-Jarai Z, Haiman CA. Nat Genet. 2021 Mar;53(3):413. doi: 10.1038/s41588-021-00786-2. PMID: 33473200

Preoperative coronary artery calcifications in veterans predict higher all-cause mortality in early-stage lung cancer: a cohort study. Shipe ME, Maiga AW, Deppen SA, Edwards GC, Marmor HN, Pinkerman R, Smith GT, Lio E, Wright JL, Shah C, Nesbitt JC, Grogan EL. J Thorac Dis. 2021 Mar;13(3):1427-1433. doi: 10.21037/jtd-20-2102. PMID: 33841935 PMCID: PMC8024847

 

Modeling the Impact of Delaying Bariatric Surgery due to COVID-19: a Decision Analysis. Shipe ME, Beeghly-Fadiel A, Deppen SA, English W, Grogan EL. Obes Surg. 2021 Mar;31(3):1387-1391. doi: 10.1007/s11695-020-05054-6. Epub 2020 Oct 26. PMID: 33104988 PMCID: PMC7587518

Genome-wide association meta-analysis identifies pleiotropic risk loci for aerodigestive squamous cell cancers. Lesseur C, Ferreiro-Iglesias A, McKay JD, Bossé Y, Johansson M, Gaborieau V, Landi MT, Christiani DC, Caporaso NC, Bojesen SE, Amos CI, Shete S, Liu G, Rennert G, Albanes D, Aldrich MC, Tardon A, Chen C, Triantafillos L, Field JK, Teare MD, Kiemeney LA, Diergaarde B, Ferris RL, Zienolddiny S, Lam S, Olshan AF, Weissler MC, Lacko M, Risch A, Bickeböller H, Ness AR, Thomas S, Le Marchand L, Schabath MB, Wünsch-Filho V, Tajara EH, Andrew AS, Clifford GM, Lazarus P, Grankvist K, Johansson M, Arnold S, Melander O, Brunnström H, Boccia S, Cadoni G, Timens W, Obeidat M, Xiao X, Houlston RS, Hung RJ, Brennan P. PLoS Genet. 2021 Mar 5;17(3):e1009254. doi: 10.1371/journal.pgen.1009254. eCollection 2021 Mar. PMID: 33667223 PMCID: PMC7968735

 

A Call to Action: Dismantling Racial Injustices in Preclinical Research and Clinical Care of Black Patients Living with Small Cell Lung Cancer. Thomas PL, Madubata CJ, Aldrich MC, Lee MM, Owonikoko TK, Minna JD, Rudin CM, Sage J, Lovly CM. Cancer Discov. 2021 Feb;11(2):240-244. doi: 10.1158/2159-8290.CD-20-1592. Epub. 2020 Dec 14. PMID: 33318034 PMCID: PMC7858238

 

Deep Multi-path Network Integrating Incomplete Biomarker and Chest CT Data for Evaluating Lung Cancer Risk. Gao R, Tang Y, Xu K, Kammer MN, Antic SL, Deppen S, Sandler KL, Massion PP, Huo Y, Landman BA. Proc SPIE Int Soc Opt Eng. 2021 Feb;11596:115961E. doi: 10.1117/12.2580730. Epub 2021 Feb 15. PMID: 34650321 PMCID: PMC8513783

Integration of multiomic annotation data to prioritize and characterize inflammation and immune-related risk variants in squamous cell lung cancer. Sun R, Xu M, Li X, Gaynor S, Zhou H, Li Z, Bossé Y, Lam S, Tsao MS, Tardon A, Chen C, Doherty J, Goodman G, Bojesen SE, Landi MT, Johansson M, Field JK, Bickeböller H, Wichmann HE, Risch A, Rennert G, Arnold S, Wu X, Melander O, Brunnström H, Le Marchand L, Liu G, Andrew A, Duell E, Kiemeney LA, Shen H, Haugen A, Johansson M, Grankvist K, Caporaso N, Woll P, Dawn Teare M, Scelo G, Hong YC, Yuan JM, Lazarus P, Schabath MB, Aldrich MC, Albanes D, Mak R, Barbie D, Brennan P, Hung RJ, Amos CI, Christiani DC, Lin X. Genet Epidemiol. 2021 Feb;45(1):99-114. doi: 10.1002/gepi.22358. Epub 20 Sep 14. PMID: 32924180

 

Validation of Histoplasmosis Enzyme Immunoassay to Evaluate Suspicious Lung Nodules. Shipe ME, Deppen SA, Sullivan S, Kammer M, Starnes SL, Wilson DO, Massion PP, Grogan EL. Ann Thorac Surg. 2021 Feb;111(2):416-420. doi: 10.1016/j.athoracsur.2020.05.101. Epub 2020 Jul 16. PMID: 32682756

Determinants of stage at diagnosis of HPV-related cancer including area deprivation and clinical factors. Chakravarthy R, Stallings SC, Velez Edwards DR, Zhao SK, Conway D, Rao JS, Aldrich MC, Kobetz E, Wilkins CH. J Public Health (Oxf). 2021 Jan 29:fdaa246. doi: 10.1093/pubmed/fdaa246. Online ahead of print. PMID: 33512511

Assessing Lung Cancer Absolute Risk Trajectory based on a Polygenic Risk Model. Hung RJ, Warkentin MT, Brhane Y, Chatterjee N, Christiani DC, Landi MT, Caporaso NE, Liu G, Johansson M, Albanes D, Le Marchand L, Tardon A, Rennert G, Bojesen SE, Chen C, Field JK, Kiemeney LA, Lazarus P, Zienolddiny S, Lam S, Andrew AS, Arnold SM, Aldrich MC, Bickeböller H, Risch A, Schabath MB, McKay JD, Brennan P, Amos CI. Cancer Res. 2021 Jan 20:canres.1237.2020. doi: 10.1158/0008-5472.CAN-20-1237. Epub 2021 Jan 20. PMID: 33472890 PMCID: PMC7969419

African-specific improvement of a polygenic hazard score for age at diagnosis of prostate cancer. Karunamuni RA, Huynh-Le MP, Fan CC, Thompson W, Eeles RA, Kote-Jarai Z, Muir K; UKGPCS Collaborators, Lophatananon A, Tangen CM, Goodman PJ, Thompson IM Jr, Blot WJ, Zheng W, Kibel AS, Drake BF, Cussenot O, Cancel-Tassin G, Menegaux F, Truong T, Park JY, Lin HY, Bensen JT, Fontham ETH, Mohler JL, Taylor JA, Multigner L, Blanchet P, Brureau L, Romana M, Leach RJ, John EM, Fowke J, Bush WS, Aldrich M, Crawford DC, Srivastava S, Cullen JC, Petrovics G, Parent MÉ, Hu JJ, Sanderson M, Mills IG, Andreassen OA, Dale AM, Seibert TM; PRACTICAL Consortium. Int J Cancer. 2021 Jan 1;148(1):99-105. doi: 10.1002/ijc.33282. Epub 2020 Sep 24. PMID: 32930425

Characterizing the Clinical and Genetic Spectrum of Polycystic Ovary Syndrome in Electronic Health Records. Ky'Era V Actkins, Kritika Singh, Donald Hucks, Digna R Velez Edwards, Melinda Aldrich, Jeeyeon Cha, Melissa Wellons, Lea K Davis. Clin Endocrinol Metab. 2021 Jan 1;106(1):153-167. doi: 10.1210/clinem/dgaa675. PMID: 32961557 PMCID: PMC7765638

The role of epidemiologists in SARS-CoV-2 and COVID-19 research. M Oremus, R Taylor-Wilson, M Aldrich, K Bell, J Gaudino, S Palevsky, J Payne, C Raynes-Greenow, F Sim, M Smith, S Weiss, Y Zhang. Public Health. 2021 Jan;190:e3-e4. doi: 10.1016/j.puhe.2020.10.006. Epub 2020 Oct 17. PMID: 33228975 PMCID: PMC7568048

A retrospective approach to evaluating potential adverse outcomes associated with delay of procedures for cardiovascular and cancer-related diagnoses in the context of COVID-19. Zheng NS, Warner JL, Osterman TJ, Wells QS, Shu XO, Deppen SA, Karp SJ, Dwyer S, Feng Q, Cox NJ, Peterson JF, Stein CM, Roden DM, Johnson KB, Wei WQ. J Biomed Inform. 2021 Jan;113:103657. doi: 10.1016/j.jbi.2020.103657. Epub 2020 Dec 10. PMID: 33309899 PMCID: PMC7728428

Predicting DNA methylation from genetic data lacking racial diversity using shared classified random effects. Rao JS, Zhang H, Kobetz E, Aldrich MC, Conway D. Genomics. 2021 Jan;113(1 Pt 2):1018-1028. doi: 10.1016/j.ygeno.2020.10.036. Epub 2020 Nov 5. PMID: 33161089

 

2020 Publications

Addressing Disparities in Lung Cancer Screening Eligibility and Healthcare Access. An Official American Thoracic Society Statement. Rivera MP, Katki HA, Tanner NT, Triplette M, Sakoda LC, Wiener RS, Cardarelli R, Carter-Harris L, Crothers K, Fathi JT, Ford ME, Smith R, Winn RA, Wisnivesky JP, Henderson LM, Aldrich MC. Am J Respir Crit Care Med. 2020 Oct 1;202(7):e95-e112. doi: 10.1164/rccm.202008-3053ST. PMID: 33000953 PMCID: PMC7528802

Volume Pledge is Not Associated with Better Short-Term Outcomes After Lung Cancer Resection. Farjah F, Grau-Sepulveda MV, Gaissert H, Block M, Grogan E, Brown LM, Kosinski AS, Kozower BD. J Clin Oncol. 2020 Oct 20;38(30):3518-3527. doi: 10.1200/JCO.20.00329. Epub 2020 Aug 7. PMID: 32762615

A Germline Variant at 8q24 Contributes to Familial Clustering of Prostate Cancer in Men of African Ancestry. Darst BF, Wan P, Sheng X, Bensen JT, Ingles SA, Rybicki BA, Nemesure B, John EM, Fowke JH, Stevens VL, Berndt SI, Huff CD, Strom SS, Park JY, Zheng W, Ostrander EA, Walsh PC, Srivastava S, Carpten J, Sellers TA, Yamoah K, Murphy AB, Sanderson M, Crawford DC, Gapstur SM, Bush WS, Aldrich MC, Cussenot O, Yeager M, Petrovics G, Cullen J, Neslund-Dudas C, Kittles RA, Xu J, Stern MC, Kote-Jarai Z, Govindasami K, Chokkalingam AP, Multigner L, Parent ME, Menegaux F, Cancel-Tassin G, Kibel AS, Klein EA, Goodman PJ, Drake BF, Hu JJ, Clark PE, Blanchet P, Casey G, Hennis AJM, Lubwama A, Thompson IM Jr, Leach R, Gundell SM, Pooler L, Xia L, Mohler JL, Fontham ETH, Smith GJ, Taylor JA, Eeles RA, Brureau L, Chanock SJ, Watya S, Stanford JL, Mandal D, Isaacs WB, Cooney K, Blot WJ, Conti DV, Haiman CA. Eur Urol. 2020 Sep;78(3):316-320. doi: 10.1016/j.eururo.2020.04.060. Epub 2020 May 12. PMID: 32409115

COVID-19 guidance for triage of operations for thoracic malignancies: A consensus statement from Thoracic Surgery Outcomes Research Network. Thoracic Surgery Outcomes Research Network, Inc, Antonoff M, Backhus L, Boffa DJ, Broderick SR, Brown LM, Carrott P, Clark JM, Cooke D, David E, Facktor M, Farjah F, Grogan E, Isbell J, Jones DR, Kidane B, Kim AW, Keshavjee S, Krantz S, Lui N, Martin L, Meguid RA, Meyerson SL, Mullett T, Nelson H, Odell DD, Phillips JD, Puri V, Rusch V, Shulman L, Varghese TK, Wakeam E, Wood DE. J Thorac Cardiovasc Surg. 2020 Aug;160(2):601-605. doi: 10.1016/ j.jtcvs.2020.03.061. Epub 2020 Apr 9. PMID: 32689703 PMCID: PMC7146695

COVID-19 Guidance for Triage of Operations for Thoracic Malignancies: A Consensus Statement From Thoracic Surgery Outcomes Research Network. Thoracic Surgery Outcomes Research Network, Inc, Antonoff M, Backhus L, Boffa DJ, Broderick SR, Brown LM, Carrott P, Clark JM, Cooke D, David E, Facktor M, Farjah F, Grogan E, Isbell J, Jones DR, Kidane B, Kim AW, Keshavjee S, Krantz S, Lui N, Martin L, Meguid RA, Meyerson SL, Mullett T, Nelson H, Odell DD, Phillips JD, Puri V, Rusch V, Shulman L, Varghese TK, Wakeam E, Wood DE. Ann Thorac Surg. 2020 Aug;110(2):692-696. doi: 10.1016/ j.athoracsur.2020.03.005. Epub 2020 Apr 9. PMID: 32278755 PMCID: PMC7146713

Time-distanced gates in long short-term memory networks. Gao R, Tang Y, Xu K, Huo Y, Bao S, Antic SL, Epstein ES, Deppen S, Paulson AB, Sandler KL, Massion PP, Landman BA. Med Image Anal. 2020 Jul 18;65:101785. doi: 10.1016/j.media.2020.101785. Online ahead of print. PMID: 32745977

Multi-path x-D Recurrent Neural Networks for Collaborative Image Classification. Gao R, Huo Y, Bao S, Tang Y, Antic SL, Epstein ES, Deppen S, Paulson AB, Sandler KL, Massion PP, Landman BA. Neurocomputing. 2020 Jul 15;397:48-59. doi: 10.1016/j.neucom.2020.02.033. Epub 2020 Feb 15. PMID: 32863584

Association analysis of driver-gene related genetic variants identified novel lung cancer susceptibility loci with 20,871 lung cancer cases and 15,971 controls. Wang Y, Gorlova OY, Gorlov IP, Zhu M, Dai J, Albanes D, Lam S, Tardon A, Chen C, Goodman GE, Bojesen SE, Landi MT, Johansson M, Risch A, Wichmann HE, Bickeböller H, Christiani DC, Rennert G, Arnold SM, Brennan P, Field JK, Shete S, Le Marchand L, Melander O, Brunnström H, Liu G, Hung RJ, Andrew AS, Kiemeney LA, Zienolddiny S, Grankvist K, Johansson M, Caporaso NE, Woll PJ, Lazarus P, Schabath MB, Aldrich MC, Stevens VL, Ma H, Jin G, Hu Z, Amos CI, Shen H. Cancer Epidemiol Biomarkers Prev. 2020 Jul;29(7):1423-1429. doi: 10.1158/1055-9965.EPI-19-1085. Epub 2020 Apr 10. PMID: 32277007

National Lung Cancer Screening Utilization Trends in the Veterans Health Administration. Lewis JA, Samuels LR, Denton J, Edwards GC, Matheny ME, Maiga A, Slatore CG, Grogan E, Kim J, Sherrier RH, Dittus RS, Massion PP, Keohane L, Nikpay S, Roumie CL. JNCI Cancer Spectr. 2020 Jun 13;4(5):pkaa053. doi: 10.1093/jncics/pkaa053. eCollection 2020 Oct. PMID: 33490864 PMCID: PMC7583162

Education Level Predicts Appropriate Follow-Up of Incidental Findings From Lung Cancer Screening. Kapoor S, Deppen SA, Paulson AB, Haddad D, Cook JP, Sandler KL. J Am Coll Radiol. 2020 May;17(5):613-6192020. doi: 10.1016/j.jacr.2019.12.014. Epub 2020 Jan 10. PMID: 31930985

Genome-wide association study of INDELs identified four novel susceptibility loci associated with lung cancer risk. Dai J, Huang M, Amos CI, Hung RJ, Tardon A, Andrew A, Chen C, Christiani DC, Albanes D, Rennert G, Fan J, Goodman G, Liu G, Field JK, Grankvist K, Kiemeney LA, Le Marchand L, Schabath MB, Johansson M, Aldrich MC, Johansson M, Caporaso N, Lazarus P, Lam S, Bojesen SE, Arnold S, Landi MT, Risch A, Wichmann HE, Bickeboller H, Brennan P, Shete S, Melander O, Brunnstrom H, Zienolddiny S, Woll P, Stevens V, Hu Z, Shen H. Int J Cancer. 2020 May 15;146(10):2855-2864. doi: 10.1002/ijc.32698. Epub 2019 Oct 31. PMID: 31577861

Protein-altering germline mutations implicate novel genes related to lung cancer development. Ji X, Mukherjee S, Landi MT, Bosse Y, Joubert P, Zhu D, Gorlov I, Xiao X, Han Y, Gorlova O, Hung RJ, Brhane Y, Carreras-Torres R, Christiani DC, Caporaso N, Johansson M, Liu G, Bojesen SE, Le Marchand L, Albanes D, Bickeböller H, Aldrich MC, Bush WS, Tardon A, Rennert G, Chen C, Byun J, Dragnev KH, Field JK, Kiemeney LF, Lazarus P, Zienolddiny S, Lam S, Schabath MB, Andrew AS, Bertazzi PA, Pesatori AC, Diao N, Su L, Song L, Zhang R, Leighl N, Johansen JS, Mellemgaard A, Saliba W, Haiman C, Wilkens L, Fernandez-Somoano A, Fernandez-Tardon G, Heijden EHFMV, Kim JH, Davies MPA, Marcus MW, Brunnström H, Manjer J, Melander O, Muller DC, Overvad K, Trichopoulou A, Tumino R, Goodman GE, Cox A, Taylor F, Woll P, Wichmann E, Muley T, Risch A, Rosenberger A, Grankvist K, Johansson M, Shepherd F, Tsao MS, Arnold SM, Haura EB, Bolca C, Holcatova I, Janout V, Kontic M, Lissowska J, Mukeria A, Ognjanovic S, Orlowski TM, Scelo G, Swiatkowska B, Zaridze D, Bakke P, Skaug V, Butler LM, Offit K, Srinivasan P, Bandlamudi C, Hellmann MD, Solit DB, Robson ME, Rudin CM, Stadler ZK, Taylor BS, Berger MF, Houlston R, McLaughlin J, Stevens V, Nickle DC, Obeidat M, Timens W, Artigas MS, Shete S, Brenner H, Chanock S, Brennan P, McKay JD, Amos CI. Nat Commun. 2020 May 11;11(1):2220. doi: 10.1038/s41467-020-15905-6. PMID: 32393777 PMCID: PMC7214407

Mortality for Robotic- vs Video-Assisted Lobectomy-Treated Stage I Non-Small Cell Lung Cancer Patients. Cui Y, Grogan EL, Deppen SA, Wang F, Massion PP, Bailey CE, Zheng W, Cai H, Shu XO. JNCI Cancer Spectr. 2020 Apr 15;4(5):pkaa028. doi: 10.1093/jncics/pkaa028. eCollection 2020 Oct. PMID: 33215060 PMCID: PMC7660043

Transcriptome-wide association study reveals candidate causal genes for lung cancer. Bossé Y, Li Z, Xia J, Manem V, Carreras-Torres R, Gabriel A, Gaudreault N, Albanes D, Aldrich MC, Andrew A, Arnold S, Bickeböller H, Bojesen SE, Brennan P, Brunnstrom H, Caporaso N, Chen C, Christiani DC, Field JK, Goodman G, Grankvist K, Houlston R, Johansson M, Johansson M, Kiemeney LA, Lam S, Landi MT, Lazarus P, Le Marchand L, Liu G, Melander O, Rennert G, Risch A, Rosenberg SM, Schabath MB, Shete S, Song Z, Stevens VL, Tardon A, Wichmann HE, Woll P, Zienolddiny S, Obeidat M, Timens W, Hung RJ, Joubert P, Amos CI, McKay JD. Int J Cancer. 2020 Apr 1;146(7):1862-1878. doi: 10.1002/ijc.32771. Epub 2019 Dec 9. PMID: 31696517

Disparities in Lung Cancer Screening: A Review.  Haddad DN, Sandler KL, Henderson LM, Rivera MP, Aldrich MC. Ann Am Thorac Soc. 2020 Apr;17(4):399-405. doi: 10.1513/AnnalsATS.201907-556CME. PMID: 32017612

The Society of Thoracic Surgeons Composite Score Rating for Pulmonary Resection for Lung Cancer. Broderick SR, Grau-Sepulveda M, Kosinski AS, Kurlansky PA, Shahian DM, Jacobs JP, Becker S, DeCamp MM, Seder CW, Grogan EL, Brown LM, Burfiend W, Magee M, Raymond DP, Puri V, Chang AC, Kozower BD. Ann Thorac Surg. 2020 Mar;109(3):848-855. doi: 10.1016/j.athoracsur.2019.08.114. Epub 2019 Nov 2. PMID: 31689407

Association of a Lung Screening Program Coordinator With Adherence to Annual CT Lung Screening at a Large Academic Institution. Spalluto LB, Lewis JA, LaBaze S, Sandler KL, Paulson AB, Callaway-Lane C, Grogan EL, Massion PP, Roumie CL. J Am Coll Radiol. 2020 Feb;17(2):208-215. doi: 10.1016/ j.jacr.2019.08.010. Epub 2019 Sep 6. PMID: 31499025

Immune-mediated genetic pathways resulting in pulmonary function impairment increase lung cancer susceptibility. Kachuri L, Johansson M, Rashkin SR, Graff RE, Bossé Y, Manem V, Caporaso NE, Landi MT, Christiani DC, Vineis P, Liu G, Scelo G, Zaridze D, Shete SS, Albanes D, Aldrich MC, Tardón A, Rennert G, Chen C, Goodman GE, Doherty JA, Bickeböller H, Field JK, Davies MP, Dawn Teare M, Kiemeney LA, Bojesen SE, Haugen A, Zienolddiny S, Lam S, Le Marchand L, Cheng I, Schabath MB, Duell EJ, Andrew AS, Manjer J, Lazarus P, Arnold S, McKay JD, Emami NC, Warkentin MT, Brhane Y, Obeidat M, Martin RM, Relton C, Davey Smith G, Haycock PC, Amos CI, Brennan P, Witte JS, Hung RJ. Nat Commun. 2020 Jan 7;11(1):27. doi: 10.1038/s41467-019-13855-2. PMID: 3191164 PMCID: PMC6946810

Defining Equity in Eligibility for Cancer Screening-Reply. Aldrich MC, Blot WJ, Blume JD. JAMA Oncol. 2020 Jan 1;6(1):156-157. doi: 10.1001/ jamaoncol.2019.4604. PMID: 31697339

 

2019 Publications

Risk Prediction in Clinical Practice-A Practical Guide for Cardiothoracic Surgeons.   Maiga A, Farjah F, Blume J, Deppen S, Welty VF, D'Agostino RS, Colditz GA, Kozower BD, Grogan EL. Ann Thorac Surg. 2019 Nov;108(5):1573-1582. doi: 10.1016/j.athoracsur.2019.04.126. PMID: 31255609

68Ga-DOTATATE: Significance of Uptake in the Tail of the Pancreas in Patients Without Lesions.  Delbeke D, Newman G, Deppen S, Shah C, Ndolo J, Shi C, Bailey CE, Jessop AC, Sandler MP. Clin Nucl Med. 2019 Nov;44(11):851-854. doi: 10.1097/RLU.0000000000002757. PMID: 31524686

Incrementally Transforming Electronic Medical Records into the Observational Medical Outcomes Partnership Common Data Model: A Multidimensional Quality Assurance Approach. Lynch KE, Deppen SA, DuVall SL, Viernes B, Cao A, Park D, Hanchrow E, Hewa K, Greaves P, Matheny ME. Appl Clin Inform. 2019 Oct;10(5):794-803. doi: 10.1055/s-0039-1697598. Epub 2019 Oct 23. PMID: 31645076 PMCID: PMC6811349

The Impact of an Interventional Pulmonary Program on Nontherapeutic Lung Resections. Polcz ME, Maiga AW, Brown LB, Deppen SA, Montgomery C, Rickman O, Grogan EL. J Bronchology Interv Pulmonol. 2019 Oct;26(4):287-289. doi: 10.1097/LBR.0000000000000592. PMID: 30958395

Evaluation of USPSTF Lung Cancer Screening Guidelines Among African American Adult Smokers. Aldrich MC, Mercaldo SF, Sandler KL, Blot WJ, Grogan EL, Blume JD. JAMA Oncol. 2019 Sep 1;5(9):1318-1324. doi: 10.1001/jamaoncol.2019.1402.  PMID: 31246249 PMCID: PMC6604090

Lung Cancer Risk in Never Smokers of European Descent is Associated with Genetic Variation in the 5P15.33 TERT-CLPTM1L Region. Hung RJ, Spitz MR, Houlston RS, Schwartz AG, Field JK, Ying J, Li Y, Han Y, Ji X, Chen W, Wu X, Gorlov IP, Na J, de Andrade M, Liu G, Brhane Y, Diao N, Wenzlaff A, Davies MPA, Liloglou T, Timofeeva M, Muley T, Rennert H, Saliba W, Ryan BM, Bowman E, Barros-Dios JM, Pérez-Ríos M, Morgenstern H, Zienolddiny S, Skaug V, Ugolini D, Bonassi S, van der Heijden EHFM, Tardon A, Bojesen SE, Landi MT, Johansson M, Bickeböller H, Arnold S, Le Marchand L, Melander O, Andrew A, Grankvist K, Caporaso N, Teare MD, Schabath MB, Aldrich MC, Kiemeney LA, Wichmann HE, Lazarus P, Mayordomo J, Neri M, Haugen A, Zhang ZF, Ruano-Raviña A, Brenner H, Harris CC, Orlow I, Rennert G, Risch A, Brennan P, Christiani DC, Amos CI, Yang P, Gorlova OY. J Thorac Oncol. 2019 Aug;14(8):1360-1369. doi: 10.1016/j.jtho.2019.04.008. PMID: 31009812 PMCID: PMC6833942

Analysis of biogeographic ancestry reveals complex genetic histories for indigenous communities of St. Vincent and Trinidad. Benn Torres J, Martucci V, Aldrich MC, Vilar MG, MacKinney T, Tariq M, Gaieski JB, Bharath Hernandez R, Browne ZE, Stevenson M, Walters W, Schurr TG; Genographic Consortium. Am J Phys Anthropol. 2019 Jul;169(3):482-497. doi: 10.1002/ajpa.23859. PMID: 31125126 PMCID: PMC8095721

Gender equity in epidemiology: a policy brief. Aldrich MC, Cust AE, Raynes-Greenow C; International Network for Epidemiology in Policy. Ann Epidemiol. 2019 Jul;35:1-3. doi: 10.1016/j.annepidem.2019.03.010. PMID: 31036443 PMCID: PMC6779121

Uptake of Video-Assisted Thoracoscopic Lung Resections within the Veterans Affairs for Known or Suspected Lung Cancer. Maiga AW, Deppen SA, Denton J, Matheny ME, Gillaspie EA, Nesbitt JC, Grogan EL. JAMA Surg. 2019 Jun 1;154(6):524-529. doi: 10.1001/jamasurg.2019.0035. PMID: 20865221 PMCID: PMC6583397

Systematic analyses of regulatory variants in DNase I hypersensitive sites identified two novel lung cancer susceptibility loci. Dai J, Li Z, Amos CI, Hung RJ, Tardon A, Andrew A, Chen C, Christiani DC, Albanes D, van der Heijden EHFM, Duell E, Rennert G, James MD, Yuan JM, Field JK, Jonas M, Grankvist K, Le Marchand L, Teare MD, Schabath MB, Aldrich MC, Tsao MS, Lazarus P, Stephen L, Bojesen SE, Susanne A, Wu X, Haugen A, Vladimir J, Johansson M, Yonathan B, Fernandez-Somoano A, Kiemeney LA, Davies M, Zienolddiny S, Hu Z, Shen H. Carcinogenesis. 2019 May 14;40(3):432-440. doi: 10.1093/carcin/bgy187. PMID: 30590402 PMCID: PMC6783905

A Social Determinant of Health May Modify Genetic Associations for Blood Pressure: Evidence From a SNP by Education Interaction in an African American Population. Hollister BM, Farber-Eger E, Aldrich MC, Crawford DC. Front Genet. 2019 May 10;10:428. doi: 10.3389/fgene.2019.00428. eCollection 2019. PMID: 31134134 PMCID: PMC6523518

Elevated platelet count appears to be causally associated with increased risk of lung cancer: A Mendelian randomization analysis. Zhu Y, Wei Y, Zhang R, Dong X, Shen S, Zhao Y, Bai J, Albanes D, Caporaso NE, Landi MT, Zhu B, Chanock SJ, Gu F, Lam S, Tsao MS, Shepherd FA, Tardon A, Fernández-Somoano A, Fernandez-Tardon G, Chen C, Barnett MJ, Doherty J, Bojesen SE, Johansson M, Brennan P, McKay JD, Carreras-Torres R, Muley T, Risch A, Wichmann HE, Bickeboeller H, Rosenberger A, Rennert G, Saliba W, Arnold SM, Field JK, Davies MPA, Marcus MW, Wu X, Ye Y, Le Marchand L, Wilkens LR, Melander O, Manjer J, Brunnström H, Hung RJ, Liu G, Brhane Y, Kachuri L, Andrew AS, Duell EJ, Kiemeney LA, van der Heijden EHFM, Haugen A, Zienolddiny S, Skaug V, Grankvist K, Johansson M, Woll PJ, Cox A, Taylor F, Teare DM, Lazarus P, Schabath MB, Aldrich MC, Houlston RS, McLaughlin J, Stevens VL, Shen H, Hu Z, Dai J, Amos CI, Han Y, Zhu D, Goodman GE, Chen F, Christiani DC. Cancer Epidemiol Biomarkers Prev. 2019 May;28(5):935-942.. pii: cebp.0356.2018. doi: 10.1158/1055-9965.EPI-18-0356. PMID: 30700444 PMCID: PMC7075698

Outcomes of Extracorporeal Membrane Oxygenation as a Bridge to Lung Transplantation. Tipograf Y, Salna M, Minko E, Grogan E, Agerstrand C, Sonett J, Brodie D, Bacchetta M. Ann Thorac Surg. 2019 May;107(5):1456-1463. doi: 10.1016/j.athoracsur.2019.01.032. Epub 2019 Feb 18. PMID: 30790550

Cross-cancer pleiotropic associations with lung cancer risk in African Americans. Jones CC, Bradford Y, Amos CI, Blot WJ, Chanock SJ, Harris CC, Schwartz AG, Spitz MR, Wiencke JK, Wrensch MR, Wu X, Aldrich MC. Cancer Epidemiology, Biomarkers & Prevention. 2019 Apr;28(4):715-723. doi: 10.1158/1055-9965.EPI-18-0935. Epub 2019 Mar 20. PMID: 30894353 PMCID: PMC6449205

Genetic interaction analysis among oncogenesis-related genes revealed novel genes and networks in lung cancer development. Li Y, Xiao X, Bossé Y, Gorlova O, Gorlov I, Han Y, Byun J, Leighl N, Johansen JS, Barnett M, Chen C, Goodman G, Cox A, Taylor F, Woll P, Wichmann HE, Manz J, Muley T, Risch A, Rosenberger A, Han J, Siminovitch K, Arnold SM, Haura EB, Bolca C, Holcatova I, Janout V, Kontic M, Lissowska J, Mukeria A, Ognjanovic S, Orlowski TM, Scelo G, Swiatkowska B, Zaridze D, Bakke P, Skaug V, Zienolddiny S, Duell EJ, Butler LM, Houlston R, Artigas MS, Grankvist K, Johansson M, Shepherd FA, Marcus MW, Brunnström H, Manjer J, Melander O, Muller DC, Overvad K, Trichopoulou A, Tumino R, Liu G, Bojesen SE, Wu X, Le Marchand L, Albanes D, Bickeböller H, Aldrich MC, Bush WS, Tardon A, Rennert G, Teare MD, Field JK, Kiemeney LA, Lazarus P, Haugen A, Lam S, Schabath MB, Andrew AS, Bertazzi PA, Pesatori AC, Christiani DC, Caporaso N, Johansson M, McKay JD, Brennan P, Hung RJ, Amos CI. 2019 Mar 5;10(19):1760-1774. doi: 10.18632/oncotarget.26678. eCollection 2019 Mar 5. PMID: 30956756 PMCID: PMC6442994

Developing prediction models for clinical use using logistic regression: an overview. Shipe ME, Deppen SA, Farjah F, Grogan EL. J Thorac Dis 2019 Mar;11(Suppl 4):S574-S584. doi: 10.21037/jtd.2019.01.25. Review. PMID: 31032076 PMCID: PMC6465431

Accuracy of a novel histoplasmosis enzyme immunoassay to evaluate suspicious lung nodules. Deppen SA, Massion PP, Blume J, Walker RC, Antic S, Chen H, Durkin MM, Wheat LJ, Grogan EL. Cancer Epidemiol Biomarkers Prev. 2019 Feb;28(2):321-326. doi: 10.1158/1055-9965. EPI-18-0169. Epub 2018 Oct 19. PMID: 30341097 PMCID: PMC6363824

Shared heritability and functional enrichment across six solid cancers. Jiang X, Finucane HK, Schumacher FR, Schmit SL, Tyrer JP, Han Y, Michailidou K, Lesseur C, Kuchenbaecker KB, Dennis J, Conti DV, Casey G, Gaudet MM, Huyghe JR, Albanes D, Aldrich MC, Andrew AS, Andrulis IL, Anton-Culver H, Antoniou AC, Antonenkova NN, Arnold SM, Aronson KJ, Arun BK, Bandera EV, Barkardottir RB, Barnes DR, Batra J, Beckmann MW, Benitez J, Benlloch S, Berchuck A, Berndt SI, Bickeböller H, Bien SA, Blomqvist C, Boccia S, Bogdanova NV, Bojesen SE, Bolla MK, Brauch H, Brenner H, Brenton JD, Brook MN, Brunet J, Brunnström H, Buchanan DD, Burwinkel B, Butzow R, Cadoni G, Caldés T, Caligo MA, Campbell I, Campbell PT, Cancel-Tassin G, Cannon-Albright L, Campa D, Caporaso N, Carvalho AL, Chan AT, Chang-Claude J, Chanock SJ, Chen C, Christiani DC, Claes KBM, Claessens F, Clements J, Collée JM, Correa MC, Couch FJ, Cox A, Cunningham JM, Cybulski C, Czene K, Daly MB, deFazio A, Devilee P, Diez O, Gago-Dominguez M, Donovan JL, Dörk T, Duell EJ, Dunning AM, Dwek M, Eccles DM, Edlund CK, Edwards DRV, Ellberg C, Evans DG, Fasching PA, Ferris RL, Liloglou T, Figueiredo JC, Fletcher O, Fortner RT, Fostira F, Franceschi S, Friedman E, Gallinger SJ, Ganz PA, Garber J, García-Sáenz JA, Gayther SA, Giles GG, Godwin AK, Goldberg MS, Goldgar DE, Goode EL, Goodman MT, Goodman G, Grankvist K, Greene MH, Gronberg H, Gronwald J, Guénel P, Håkansson N, Hall P, Hamann U, Hamdy FC, Hamilton RJ, Hampe J, Haugen A, Heitz F, Herrero R, Hillemanns P, Hoffmeister M, Høgdall E, Hong YC, Hopper JL, Houlston R, Hulick PJ, Hunter DJ, Huntsman DG, Idos G, Imyanitov EN, Ingles SA, Isaacs C, Jakubowska A, James P, Jenkins MA, Johansson M, Johansson M, John EM, Joshi AD, Kaneva R, Karlan BY, Kelemen LE, Kühl T, Khaw KT, Khusnutdinova E, Kibel AS, Kiemeney LA, Kim J, Kjaer SK, Knight JA, Kogevinas M, Kote-Jarai Z, Koutros S, Kristensen VN, Kupryjanczyk J, Lacko M, Lam S, Lambrechts D, Landi MT, Lazarus P, Le ND, Lee E, Lejbkowicz F, Lenz HJ, Leslie G, Lessel D, Lester J, Levine DA, Li L, Li CI, Lindblom A, Lindor NM, Liu G, Loupakis F, Lubiński J, Maehle L, Maier C, Mannermaa A, Marchand LL, Margolin S, May T, McGuffog L, Meindl A, Middha P, Miller A, Milne RL, MacInnis RJ, Modugno F, Montagna M, Moreno V, Moysich KB, Mucci L, Muir K, Mulligan AM, Nathanson KL, Neal DE, Ness AR, Neuhausen SL, Nevanlinna H, Newcomb PA, Newcomb LF, Nielsen FC, Nikitina-Zake L, Nordestgaard BG, Nussbaum RL, Offit K, Olah E, Olama AAA, Olopade OI, Olshan AF, Olsson H, Osorio A, Pandha H, Park JY, Pashayan N, Parsons MT, Pejovic T, Penney KL, Peters WHM, Phelan CM, Phipps AI, Plaseska-Karanfilska D, Pring M, Prokofyeva D, Radice P, Stefansson K, Ramus SJ, Raskin L, Rennert G, Rennert HS, van Rensburg EJ, Riggan MJ, Risch HA, Risch A, Roobol MJ, Rosenstein BS, Rossing MA, De Ruyck K, Saloustros E, Sandler DP, Sawyer EJ, Schabath MB, Schleutker J, Schmidt MK, Setiawan VW, Shen H, Siegel EM, Sieh W, Singer CF, Slattery ML, Sorensen KD, Southey MC, Spurdle AB, Stanford JL, Stevens VL, Stintzing S, Stone J, Sundfeldt K, Sutphen R, Swerdlow AJ, Tajara EH, Tangen CM, Tardon A, Taylor JA, Teare MD, Teixeira MR, Terry MB, Terry KL, Thibodeau SN, Thomassen M, Bjørge L, Tischkowitz M, Toland AE, Torres D, Townsend PA, Travis RC, Tung N, Tworoger SS, Ulrich CM, Usmani N, Vachon CM, Van Nieuwenhuysen E, Vega A, Aguado-Barrera ME, Wang Q, Webb PM, Weinberg CR, Weinstein S, Weissler MC, Weitzel JN, West CML, White E, Whittemore AS, Wichmann HE, Wiklund F, Winqvist R, Wolk A, Woll P, Woods M, Wu AH, Wu X, Yannoukakos D, Zheng W, Zienolddiny S, Ziogas A, Zorn KK, Lane JM, Saxena R, Thomas D, Hung RJ, Diergaarde B, McKay J, Peters U, Hsu L, García-Closas M, Eeles RA, Chenevix-Trench G, Brennan PJ, Haiman CA, Simard J, Easton DF, Gruber SB, Pharoah PDP, Price AL, Pasaniuc B, Amos CI, Kraft P, Lindström S. Nat Commun. 2019 Jan 25;10(1):431. doi: 10.1038/s41467-018-08054-4. PMID: 30683880 PMCID: PMC6347624

Defining Proficiency for Society of Thoracic Surgeons Participants Performing Thoracoscopic Lobectomy. Puri V, Gaissert HA, Wormuth DW, Grogan EL, Burfeind WR, Chang AC, Seder CW, Fernandez FG, Brown L, Magee MJ, Kosinski AS, Raymond DP, Broderick SR, Welsh RJ, DeCamp MM, Farjah F, Edwards MA, Kozower BD. Ann Thorac Surg. 2019 Jan;107(1):202-208. doi: 10.1016/j.athoracsur.2018.07.074. Epub 2018 Sep 28. PMID: 30273574

 

2018 Publications 

Long-term Physical HRQOL Decreases after Single Lung as Compared to Double Lung Transplantation. Gilmore DM, Grogan E, Feurer ID, Hoy H, Rega SA, Barnes J, Park R, Staykov M, Via M, Shaver CM, Pinson CW, Lambright E. Ann Thorac Surg. Dec;106(6):1633-1639. doi: 10.1016/j.athoracsur.2018.06.072. Epub 2018 Aug 16. PMID: 30120941 PMCID: PMC6240480

Genetic modifiers of radon-induced lung cancer risk: a genome-wide interaction study in former uranium miners. Rosenberger A, Hung RJ, Christiani DC, Caporaso NE, Liu G, Bojesen SE, Le Marchand L, Haiman CA, Albanes D, Aldrich MC, Tardon A, Fernández-Tardón G, Rennert G, Field JK, Kiemeney B, Lazarus P, Haugen A, Zienolddiny S, Lam S, Schabath MB, Andrew AS, Brunnsstöm H, Goodman GE, Doherty JA, Chen C, Teare MD, Wichmann HE, Manz J, Risch A, Muley TR, Johansson M, Brennan P, Landi MT, Amos CI, Pesch B, Johnen G, Brüning T, Bickeböller H, Gomolka M. Int Arch Occup Environ Health. 2018 Nov;91(8):937-950. doi: 10.1007/s00420-018-1334-3. PMID: 29971594 PMCID: PMC6375683

Mapping Histoplasma capsulatum Exposure, United States. Maiga AW, Deppen S, Scaffidi BK, Baddley J, Aldrich MC, Dittus RS, Grogan EL. Emerg Infect Dis. 2018 Oct;24(10):1835-1839. doi: 10.3201/eid2410.180032. PMID: 30226187 PMCID: PMC6154167

Racial disparities in lung cancer survival: The contribution of stage, treatment, and ancestry. Jones CC, Fletcher S, Blume J, Wenzlaff A, Chen H, Deppen SA, Bush WS, Crawford DC, Schwartz A, Blot WJ, Grogan EL, Aldrich MC. Journal of Thoracic Oncology. 2018 Oct;13(10):1464-1473. doi: 10.1016/j.jtho.2018.05.032. PMID: 29885480 PMCID: PMC6153049​

Fine mapping of MHC region in lung cancer highlights independent susceptibility loci by ethnicity. Ferreiro-Iglesias A, Lesseur C, McKay J, Hung RJ, Han Y, Zong X, Christiani D, Johansson M, Xiao X, Li Y, Qian DC, Ji X, Liu G, Caporaso N, Scelo G, Zaridze D, Mukeriya A, Kontic M, Ognjanovic S, Lissowska J, Szołkowska M, Swiatkowska B, Janout V, Holcatova I, Bolca C, Savic M, Ognjanovic M, Bojesen SE, Wu X, Albanes D, Aldrich MC, Tardon A, Fernandez-Somoano A, Fernandez-Tardon G, Le Marchand L, Rennert G, Chen C, Doherty J, Goodman G, Bickeböller H, Wichmann HE, Risch A, Rosenberger A, Shen H, Dai J, Field JK, Davies M, Woll P, Teare MD, Kiemeney LA, van der Heijden EHFM, Yuan JM, Hong YC, Haugen A, Zienolddiny S, Lam S, Tsao MS, Johansson M, Grankvist K, Schabath MB, Andrew A, Duell E, Melander O, Brunnström H, Lazarus P, Arnold S, Slone S, Byun J, Kamal A, Zhu D, Landi MT, Amos CI, Brennan P. Nat Commun. 2018 Sep 25;9(1):3927. doi: 10.1038/s41467-018-05890-2. PMID: 30254314 PMCID: PMC6156406

Month-long cardiac surgery boot camp: A proposal to jumpstart resident training. Nesbitt JC, Michaud NM, Brakebill A, Deppen SA, Williams P.  J Thorac Cardiovasc Surg. 2018 Sep;156(3):1151-1157. doi: 10.1016/j.jtcvs.2018.03.048. PMID: 29655539

Neighbourhood deprivation and lung cancer risk: a nested case-control study in the USA. Sanderson M, Aldrich MC, Levine RS, Kilbourne B, Cai Q, Blot WJ. BMJ Open. 2018 Sep 10;8(9):e021059. doi: 10.1136/bmjopen-2017-021059. PMID: 30206077 PMCID: PMC6144393​

Identification of susceptibility pathways for the role of chromosome 15q25.1 in modifying lung cancer risk. Ji X, Bossé Y, Landi MT, Gui J, Xiao X, Qian D, Joubert P, Lamontagne M, Li Y, Gorlov I, de Biasi M, Han Y, Gorlova O, Hung RJ, Wu X, McKay J, Zong X, Carreras-Torres R, Christiani DC, Caporaso N, Johansson M, Liu G, Bojesen SE, Le Marchand L, Albanes D, Bickeböller H, Aldrich MC, Bush WS, Tardon A, Rennert G, Chen C, Teare MD, Field JK, Kiemeney LA, Lazarus P, Haugen A, Lam S, Schabath MB, Andrew AS, Shen H, Hong YC, Yuan JM, Bertazzi PA, Pesatori AC, Ye Y, Diao N, Su L, Zhang R, Brhane Y, Leighl N, Johansen JS, Mellemgaard A, Saliba W, Haiman C, Wilkens L, Fernandez-Somoano A, Fernandez-Tardon G, van der Heijden EHFM, Kim JH, Dai J, Hu Z, Davies MPA, Marcus MW, Brunnström H, Manjer J, Melander O, Muller DC, Overvad K, Trichopoulou A, Tumino R, Doherty J, Goodman GE, Cox A, Taylor F, Woll P, Brüske I, Manz J, Muley T, Risch A, Rosenberger A, Grankvist K, Johansson M, Shepherd F, Tsao MS, Arnold SM, Haura EB, Bolca C, Holcatova I, Janout V, Kontic M, Lissowska J, Mukeria A, Ognjanovic S, Orlowski TM, Scelo G, Swiatkowska B, Zaridze D, Bakke P, Skaug V, Zienolddiny S, Duell EJ, Butler LM, Koh WP, Gao YT, Houlston R, McLaughlin J, Stevens V, Nickle DC, Obeidat M, Timens W, Zhu B, Song L, Artigas MS, Tobin MD, Wain LV, Gu F, Byun J, Kamal A, Zhu D, Tyndale RF, Wei WQ, Chanock S, Brennan P, Amos CI. 2018 Aug 13;9(1):3221. doi: 10.1038/s41467-018-05074-y. PMID: 30104567 PMCID: PMC6089967

Mendelian Randomization and mediation analysis of leukocyte telomere length and risk of lung and head and neck cancers. ​Kachuri L, Saarela O, Bojesen SE, Davey Smith G, Liu G, Landi MT, Caporaso NE, Christiani DC, Johansson M, Panico S, Overvad K, Trichopoulou A, Vineis P, Scelo G, Zaridze D, Wu X, Albanes D, Diergaarde B, Lagiou P, Macfarlane GJ, Aldrich MC, Tardón A, Rennert G, Olshan AF, Weissler MC, Chen C, Goodman GE, Doherty JA, Ness AR, Bickeböller H, Wichmann HE, Risch A, Field JK, Teare MD, Kiemeney LA, van der Heijden EHFM, Carroll JC, Haugen A, Zienolddiny S, Skaug V, Wünsch-Filho V, Tajara EH, Ayoub Moysés R, Daumas Nunes F, Lam S, Eluf-Neto J, Lacko M, Peters WHM, Le Marchand L, Duell EJ, Andrew AS, Franceschi S, Schabath MB, Manjer J, Arnold S, Lazarus P, Mukeriya A, Swiatkowska B, Janout V, Holcatova I, Stojsic J, Mates D, Lissowska J, Boccia S, Lesseur C, Zong X, McKay JD, Brennan P, Amos CI, Hung RJ. Int J Epidemiol. 2018 Jul 28. doi: 10.1093/ije/dyy140. [Epub ahead of print] PMID: 30059977 PMCID: PMC6659464

Lung Cancer: One Disease or Many. O'Brien TD, Jia P, Aldrich MC, Zhao Z. Human Heredity. 2018;83(2):65-70. doi: 10.1159/000488942. Epub 2018 Jun 5. PMID: 29864749 PMCID: PMC6261707

Impact of Culture-Independent Diagnostic Testing on Recovery of Enteric Bacterial Infections. Imdad A, Retzer F, Thomas LS, McMillian M, Garman K, Rebeiro PF, Deppen SA, Dunn JR, Woron AM. Clin Infect Dis. 2018 Jun 1;66(12):1892-1898. doi: 10.1093/cid/cix1128. PMID: 29293941 PMCID: PMC6248818

A phenome-wide association study uncovers a role for autoimmunity in the development of COPD. Ji X, Niu X, Qian J, Martucci V, Pendergrass SP, Gorlov IP, Amos CI, Denny JC, Massion PP, Aldrich MC. American Journal of Respiratory Cell and Molecular Biology. 2018 June; 58(6) 777-779. PMID: 29856256 PMCID: PMC6002656

Assessment of Fluorodeoxyglucose F18-Labeled Positron Emission Tomography for Diagnosis of High-Risk Lung Nodules. Maiga AW, Deppen SA, Mercaldo SF, Blume JD, Montgomery C, Vaszar LT, Williamson C, Isbell JM, Rickman OB, Pinkerman R, Lambright ES, Nesbitt JC, Grogan EL. JAMA Surg. 2018 Apr 1;153(4):329-334. doi: 10.1001/jamasurg.2017. 4495. PMID: 29117314 PMCID: PMC5910279

​Communication About the Probability of Cancer in Indeterminate Pulmonary Nodules. Maiga AW, Deppen SA, Massion PP, Callaway-Lane C, Pinkerman R, Dittus RS, Lambright EL, Nesbitt JC, Grogan EL. JAMA Surg. 2018 Apr 1;153(4):353-357. doi 10.1001/jamasurg. PMID: 29261826 PMCID: PMC5910256

Month-long cardiac surgery boot camp: A proposal to jumpstart resident training. Nesbitt JC, Michaud NM, Brakebill A, Deppen SA, Williams P. J Thorac Cardiovasc Surg. 2018 Mar 17. pii: S0022-5223(18)30827-4. doi: 10.1016/j.jtcvs.2018.03.048. [Epub ahead of print] PMID: 29655539

Genome-wide interaction study of smoking behavior and non-small cell lung cancer risk in Caucasian population. Li Y, Xiao X, Han Y, Gorlova O, Qian D, Leighl N, Johansen JS, Barnett M, Chen C, Goodman G, Cox A, Taylor F, Woll P, Wichmann HE, Manz J, Muley T, Risch A, Rosenberger A, Arnold SM, Haura EB, Bolca C, Holcatova I, Janout V, Kontic M, Lissowska J, Mukeria A, Ognjanovic S, Orlowski TM, Scelo G, Swiatkowska B, Zaridze D, Bakke P, Skaug V, Zienolddiny S, Duell EJ, Butler LM, Houlston R, Artigas MS, Grankvist K, Johansson M, Shepherd FA, Marcus MW, Brunnström H, Manjer J, Melander O, Muller DC, Overvad K, Trichopoulou A, Tumino R, Liu G, Bojesen SE, Wu X, Le Marchand L, Albanes D, Bickeböller H, Aldrich MC, Bush WS, Tardon A, Rennert G, Teare MD, Field JK, Kiemeney LA, Lazarus P, Haugen A, Lam S, Schabath MB, Andrew AS, Bertazzi PA, Pesatori AC, Christiani DC, Caporaso N, Johansson M, McKay JD, Brennan P, Hung RJ, Amos CI. Carcinogenesis. 2018 Mar 8;39(3):336-346. doi: 10.1093/carcin/bgx113. PMID: 290593 PMCID: PMC6248554

Outcome-related, auxiliary variable sampling designs for longitudinal binary data. Schildcrout JS, Schisterman EF, Aldrich MC, Rathouz PJ. Epidemiology. 2018 Jan;29(1):58-66. doi: 10.1097/EDE.0000000000000765. PMID: 29068841  PMCID: PMC5718926

 

2017 Publications

tPA and DNase for Complicated Parapneumonic Effusions and Empyemas. Maiga A, Pinkerman R, Deppen SA, Scruggs J, Mcguire P, Tarpley JL, Grogan EL. Am Surg. 2017 Dec 1;83(12):1458-1459. PMID: 29336772  PMCID: PMC5911179

Timeliness of Care and Lung Cancer Tumor-Stage Progression: How Long Can We Wait? Maiga AW, Deppen SA, Pinkerman R, Callaway-Lane C, Massion PP, Dittus RS, Lambright ES, Nesbitt JC, Baker D, Grogan EL. Ann Thorac Surg. 2017 Dec;104(6):1791-1797. doi: 10.1016/j.athoracsur.2017.06.051. PMID: 29033012 PMCID: PMC5813822

Novel Airway and Ventilator Management of Tracheobronchial Disruption after Blunt Trauma. Mehdiratta N, Archer MA, Stewart M, Dennis B, Grogan E.  Annals of Thoracic Surgery. 2017 Nov; 104(5): e359-361. PMID: 29054228

Pleiotropy of genetic variants on obesity and smoking phenotypes: Results from the Oncoarray Project of The International Lung Cancer Consortium. Wang T, Moon JY, Wu Y, Amos CI, Hung RJ, Tardon A, Andrew A, Chen C, Christiani DC, Albanes D, Heijden EHFMV, Duell E, Rennert G, Goodman G, Liu G, Mckay JD, Yuan JM, Field JK, Manjer J, Grankvist K, Kiemeney LA, Marchand LL, Teare MD, Schabath MB, Johansson M, Aldrich MC, Davies M, Johansson M, Tsao MS, Caporaso N, Lazarus P, Lam S, Bojesen SE, Arnold S, Wu X, Zong X, Hong YC, Ho GYF. PLoS One. 2017 Sep 28;12(9):e0185660. doi: 10.1371/journal.pone.0185660. eCollection 2017. PMID: 28957450 PMCID: PMC5619832

​Germline genetic variants and lung cancer survival in African Americans. Jones CC, Bush WS, Crawford DC, Wenzlaff AS, Schwartz AG, Wiencke JK, Wrensch MR, Blot WJ, Chanock SJ, Grogan EL, Aldrich MC. Cancer Epidemiol Biomarkers Prev. 2017 Aug;26(8):1288-1295. doi: 10.1158/1055-9965.EPI-16-0998. PMID: 28619829 PMCID: PMC5540773

Two Novel Susceptibility Loci for Prostate Cancer in Men of African Ancestry. ​Conti DV, Wang K, Sheng X, Bensen JT, Hazelett DJ, Cook MB, Ingles SA, Kittles RA, Strom SS, Rybicki BA, Nemesure B, Isaacs WB, Stanford JL, Zheng W, Sanderson M, John EM, Park JY, Xu J, Stevens VL, Berndt SI, Huff CD, Wang Z, Yeboah ED, Tettey Y, Biritwum RB, Adjei AA, Tay E, Truelove A, Niwa S, Sellers TA, Yamoah K, Murphy AB, Crawford DC, Gapstur SM, Bush WS, Aldrich MC, Cussenot O, Petrovics G, Cullen J, Neslund-Dudas C, Stern MC, Jarai ZK, Govindasami K, Chokkalingam AP, Hsing AW, Goodman PJ, Hoffmann T, Drake BF, Hu JJ, Clark PE, Van Den Eeden SK, Blanchet P, Fowke JH, Casey G, Hennis AJM, Han Y, Lubwama A, Thompson IM Jr, Leach R, Easton DF, Schumacher F, Van den Berg DJ, Gundell SM, Stram A, Wan P, Xia L, Pooler LC, Mohler JL, Fontham ETH, Smith GJ, Taylor JA, Srivastava S, Eeles RA, Carpten J, Kibel AS, Multigner L, Parent ME, Menegaux F, Cancel-Tassin G, Klein EA, Brureau L, Stram DO, Watya S, Chanock SJ, Witte JS, Blot WJ, Henderson BE, Haiman CA; PRACTICAL/ELLIPSE Consortium. J Natl Cancer Inst. 2017 Aug 1;109(8). doi: 10.1093/jnci/djx084. PMCID: PMC5448553

Genetic variation in the eicosanoid pathway is associated with non-small-cell lung cancer (NSCLC) survival. Sausville LN, Jones CC, Aldrich MC, Blot WJ, Pozzi A, Williams SM. PLoS One. 2017 Jul 13;12(7):e0180471. doi: 10.1371/journal.pone.0180471. eCollection 2017. PMID: 28704416 PMCID: PMC5509150

Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes. McKay JD, Hung RJ, Han Y, Zong X, Carreras-Torres R, Christiani DC, Caporaso NE, Johansson M, Xiao X, Li Y, Byun J, Dunning A, Pooley KA, Qian DC, Ji X, Liu G, Timofeeva MN, Bojesen SE, Wu X, Le Marchand L, Albanes D, Bickeböller H, Aldrich MC, Bush WS, Tardon A, Rennert G, Teare MD, Field JK, Kiemeney LA, Lazarus P, Haugen A, Lam S, Schabath MB, Andrew AS, Shen H, Hong YC, Yuan JM, Bertazzi PA, Pesatori AC, Ye Y, Diao N, Su L, Zhang R, Brhane Y, Leighl N, Johansen JS, Mellemgaard A, Saliba W, Haiman CA, Wilkens LR, Fernandez-Somoano A, Fernandez-Tardon G, van der Heijden HFM, Kim JH, Dai J, Hu Z, Davies MPA, Marcus MW, Brunnström H, Manjer J, Melander O, Muller DC, Overvad K, Trichopoulou A, Tumino R, Doherty JA, Barnett MP, Chen C, Goodman GE, Cox A, Taylor F, Woll P, Brüske I, Wichmann HE, Manz J, Muley TR, Risch A, Rosenberger A, Grankvist K, Johansson M, Shepherd FA, Tsao MS, Arnold SM, Haura EB, Bolca C, Holcatova I, Janout V, Kontic M, Lissowska J, Mukeria A, Ognjanovic S, Orlowski TM, Scelo G, Swiatkowska B, Zaridze D, Bakke P, Skaug V, Zienolddiny S, Duell EJ, Butler LM, Koh WP, Gao YT, Houlston RS, McLaughlin J, Stevens VL, Joubert P, Lamontagne M, Nickle DC, Obeidat M, Timens W, Zhu B, Song L, Kachuri L, Artigas MS, Tobin MD, Wain LV; SpiroMeta Consortium, Rafnar T, Thorgeirsson TE, Reginsson GW, Stefansson K, Hancock DB, Bierut LJ, Spitz MR, Gaddis NC, Lutz SM, Gu F, Johnson EO, Kamal A, Pikielny C, Zhu D, Lindströem S, Jiang X, Tyndale RF, Chenevix-Trench G, Beesley J, Bossé Y, Chanock S, Brennan P, Landi MT, Amos CI. 2017 Nat Genet Epub Jun 12. PMID: 28604730 PMCID: PMC5510465

Obesity, metabolic factors and risk of different histological types of lung cancer: A Mendelian randomization study. Carreras-Torres R, Johansson M, Haycock PC, Wade KH, Relton CL, Martin RM, Davey Smith G, Albanes D, Aldrich MC, Andrew A, Arnold SM, Bickeböller H, Bojesen SE, Brunnström H, Manjer J, Brüske I, Caporaso NE, Chen C, Christiani DC, Christian WJ, Doherty JA, Duell EJ, Field JK, Davies MPA, Marcus MW, Goodman GE, Grankvist K, Haugen A, Hong YC, Kiemeney LA, van der Heijden EHFM, Kraft P, Johansson MB, Lam S, Landi MT, Lazarus P, Le Marchand L, Liu G, Melander O, Park SL, Rennert G, Risch A, Haura EB, Scelo G, Zaridze D, Mukeriya A, Savić M, Lissowska J, Swiatkowska B, Janout V, Holcatova I, Mates D, Schabath MB, Shen H, Tardon A, Teare MD, Woll P, Tsao MS, Wu X, Yuan JM, Hung RJ, Amos CI, McKay J, Brennan P. 2017 PLoS One. Jun 8;12(6) PMID: 28594918 PMCID: PMC5464539

Admixture mapping of pelvic organ prolapse in African Americans from the Women's Health Initiative Hormone Therapy trial. Giri A, Hartmann KE, Aldrich MC, Ward RM, Wu JM, Park AJ, Graff M, Qi L, Nassir R, Wallace RB, O'Sullivan MJ, North KE, Velez Edwards DR, Edwards TL. 2017 PLoS One. Jun 5;12(6) PMID: 28582460 PMCID: PMC5459562

Case Report: Spindle Cell Sarcoma of the Pulmonary Artery. Christopher M. Myczkowski, Jeffery Goldstein, Peter Bream, Murray Mazer, Eric Grogan and Kim L. Sandler. Department of Radiology and Radiological Sciences, Surgery, Pathology Vanderbilt University Medical Center, Nashville, TN, USA. 2017. Journal of Cardiology and Therapeutics, DOI: https://doi.org/10.12970/2311-052X.2017.05.01

​The Society of Thoracic Surgeons Composite Score for Evaluating Esophagectomy for Esophageal Cancer. Chang AC, Kosinski AS, Raymond DP, Magee MJ, DeCamp MM, Farjah F, Grogan EL, Seder CW, Allen MS, Blasberg JD, Blackmon SH, Burfeind WR, Cassivi SD, Park BJ, Shahian DM, Wormuth DW, Han JM, Wright CD, Fernandez FG, Kozower BD. Annals of Thoracic Surgery. 2017 May;103(5):1661-1667. doi: 10.1016/j.athoracsur.2016.10.027. PMID: 28385375

Transdisciplinary approaches enhance the production of translational knowledge. ​Ciesielski TH, Aldrich MC, Marsit CJ, Hiatt RA, Williams SM. Transl Res. 2017 Apr;182:123-134. PMID 27893987 PMCID: PMC5362296

Genetic Effects on the Correlation Structure of CVD Risk Factors: Exome-Wide Data from a Ghanaian Population. Kodaman N, Sobota RS, Asselbergs FW, Oetjens MT, Moore JH, Brown NJ, Aldrich MC, Williams SM. Glob Heart. 2017 Jun;12(2):133-140. doi: 10.1016/j.gheart.2017.01.013. PMID: 28408189 PMCID: PMC5642993

68Ga-DOTATATE PET/CT imaging of indeterminate pulmonary nodules and lung cancer. Walker R, Deppen S, Smith G, Shi C, Lehman J, Clanton J, Moore B, Burns R, Grogan EL, Massion PP. PLoS One. 2017 Feb 9;12(2):e0171301. doi: 10.1371/journal.pone.0171301. eCollection 2017. PMID: 28182730 PMCID: PMC5300187

​

2016 Publications

Strategies for equitable pharmacogenomics-guided warfarin dosing among European and African American individuals. Wiley LK, Vanhouten JP, Samuels DC, Aldrich MC, Roden DM, Peterson JF, Denny JC. Pac Symp Biocomputing. 2016; 22:545-556. PMID: 27897005 PMCID: PMC5389380

Development and performance of text-mining algorithms to extract socioeconomic status from de-identified electronic health records. Hollister BM, Restrepo NA, Farber-Eger E, Crawford DC, Aldrich MC, Non A. Pac Symp Biocomput. 2016;22:230-241. PubMed PMID: 27896978 PMCID: PMC5147499

Cardiovascular disease risk factors in Ghana during the rural-to-urban transition: a cross-sectional study. Kodaman N, Aldrich MC, Sobota R, Asselbergs FW, Poku KA, Brown NJ, Moore JH, Williams SM.  2016 PLoS ONE. Oct 12; 11(10). PMID 27732601 PMCID: PMC5061429

Plasminogen Activator Inhibitor-1 and diagnosis of the metabolic syndrome in a West African population. Kodaman N, Aldrich MC, Sobota R, Asselbergs FW, Brown NJ, Moore JH, Williams SM. Journal of the American Heart Association. 2016 Oct 3;5(10). PMID: 27697752 PMCID: PMC5121488

Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome. Machiela MJ, Zhou W, Karlins E, Sampson JN, Freedman ND, Yang Q, Hicks B, Dagnall C, Hautman C, Jacobs KB, Abnet CC, Aldrich MC, Amos C, Amundadottir LT, Arslan AA, Beane-Freeman LE, Berndt SI, Black A, Blot WJ, Bock CH, Bracci PM, Brinton LA, Bueno-de-Mesquita HB, Burdett L, Buring JE, Butler MA, Canzian F, Carreón T, Chaffee KG, Chang IS, Chatterjee N, Chen C, Chen C, Chen K, Chung CC, Cook LS, Crous Bou M, Cullen M, Davis FG, De Vivo I, Ding T, Doherty J, Duell EJ, Epstein CG, Fan JH, Figueroa JD, Fraumeni JF, Friedenreich CM, Fuchs CS, Gallinger S, Gao YT, Gapstur SM, Garcia-Closas M, Gaudet MM, Gaziano JM, Giles GG, Gillanders EM, Giovannucci EL, Goldin L, Goldstein AM, Haiman CA, Hallmans G, Hankinson SE, Harris CC, Henriksson R, Holly EA, Hong YC, Hoover RN, Hsiung CA, Hu N, Hu W, Hunter DJ, Hutchinson A, Jenab M, Johansen C, Khaw KT, Kim HN, Kim YH, Kim YT, Klein AP, Klein R, Koh WP, Kolonel LN, Kooperberg C, Kraft P, Krogh V, Kurtz RC, LaCroix A, Lan Q, Landi MT, Marchand LL, Li D, Liang X, Liao LM, Lin D, Liu J, Lissowska J, Lu L, Magliocco AM, Malats N, Matsuo K, McNeill LH, McWilliams RR, Melin BS, Mirabello L, Moore L, Olson SH, Orlow I, Park JY, Patiño-Garcia A, Peplonska B, Peters U, Petersen GM, Pooler L, Prescott J, Prokunina-Olsson L, Purdue MP, Qiao YL, Rajaraman P, Real FX, Riboli E, Risch HA, Rodriguez-Santiago B, Ruder AM, Savage SA, Schumacher F, Schwartz AG, Schwartz KL, Seow A, Wendy Setiawan V, Severi G, Shen H, Sheng X, Shin MH, Shu XO, Silverman DT, Spitz MR, Stevens VL, Stolzenberg-Solomon R, Stram D, Tang ZZ, Taylor PR, Teras LR, Tobias GS, Van Den Berg D, Visvanathan K, Wacholder S, Wang JC, Wang Z, Wentzensen N, Wheeler W, White E, Wiencke JK, Wolpin BM, Wong MP, Wu C, Wu T, Wu X, Wu YL, Wunder JS, Xia L, Yang HP, Yang PC, Yu K, Zanetti KA, Zeleniuch-Jacquotte A, Zheng W, Zhou B, Ziegler RG, Perez-Jurado LA, Caporaso NE, Rothman N, Tucker M, Dean MC, Yeager M, Chanock SJ. Nat Commun. 2016 Jun 13;7:11843. doi: 10.1038/ncomms11843. PMID: 27291797 PMCID: PMC4909985

Genome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population. Zanetti KA, Wang Z, Aldrich M, Amos CI, Blot WJ, Bowman ED, Burdette L, Cai Q, Caporaso N, Chung CC, Gillanders EM, Haiman CA, Hansen HM, Henderson BE, Kolonel LN, Marchand LL, Li S, McNeill LH, Ryan BM, Schwartz AG, Sison JD, Spitz MR, Tucker M, Wenzlaff AS, Wiencke JK, Wilkens L, Wrensch MR, Wu X, Zheng W, Zhou W, Christiani D, Palmer JR, Penning TM, Rieber AG, Rosenberg L, Ruiz-Narvaez EA, Su L, Vachani A, Wei Y, Whitehead AS, Chanock SJ, Harris CC. Lung Cancer. 2016 Aug;98:33-42. doi: 10.1016/j.lungcan.2016.05.008. Epub 2016 May 13. PMID: 27393504 PMCID: PMC4939239 

Predictors of Major Morbidity or Mortality After Resection for Esophageal Cancer: A Society of Thoracic Surgeons General Thoracic Surgery Database Risk Adjustment Model. Raymond DP, Seder CW, Wright CD, Magee MJ, Kosinski AS, Cassivi SD, Grogan EL, Blackmon SH, Allen MS, Park BJ, Burfeind WR, Chang AC, DeCamp MM, Wormuth DW, Fernandez FG, Kozower BD. Ann Thorac Surg, 2016 Jul Volume: 1(102):207-14 PMCID: PMC5016796 

68Ga-DOTATATE Compared with 111In-DTPA-Octreotide and Conventional Imaging for Pulmonary and Gastroenteropancreatic Neuroendocrine Tumors: A Systematic Review and Meta-Analysis. Deppen SA, Blume J, Bobbey AJ, Shah C, Graham MM, Lee P, Delbeke D, Walker RC. J Nucl Med 2016 Jun 6(57):872-8 PMCID: PMC5362941

Safety and Efficacy of 68Ga-DOTATATE PET/CT for Diagnosis, Staging, and Treatment Management of Neuroendocrine Tumors. Deppen SA, Liu E, Blume JD, Clanton J, Shi C, Jones-Jackson LB, Lakhani V, Baum RP, Berlin J, Smith GT, Graham M, Sandler MP, Delbeke D, Walker RC. J Nucl Med 2016 May 5(57):708-14 PMCID: PMC5362940

The Great Migration and African-American Genomic Diversity. Baharian S, Barakatt M, Gignoux CR, Shringarpure S, Errington J, Blot WJ, Bustamante CD, Kenny EE, Williams SM, Aldrich MC, Gravel S. PLOS Genetics. 2016 May 27; 12(5):e1006059.doi: 10.1371/journal.pgen.1006059. PMCID: PMC4883799

A Successful Institutional Strategy to Increase the Number of Therapeutic Operations Among Patients With Lung Lesions. Maiga AW, Deppen SA, Pinkerman R, Grogan EL. JAMA Surg. 2016 February 1; 151(2): 193–194. doi: 10.1001/jamasurg.2015.3253. PMCID: PMC4758861

 

2015 Publications

Deciphering Signaling Pathway Networks to Understand Molecular Mechanism of Action of Metformin. Sun J, Zhao M, Jia P, Wang L, Wu Y, Iverson C, Zhou Y, Denny J, Aldrich MC, Xu H, Zhao Z. PLOS Computational Biology. 2015 Jun 17;11(6). PMCID: PMC4470683

The Role of Epidemiology in Evidence-based Policy-Making: A case Study of Tobacco Use in Youth. Aldrich MC, Hidalgo B, Widome R, Briss P, Brownson RC, Teutsch SM. Annals of Epidemiology 2015 May;25(5):360-5. PMID: 24875267. PMCID: PMC4211989

Characterization of large structural genetic mosaicism in human autosomes. Machiela MJ, Zhou W, Sampson JN, Dean MC, Jacobs KB, Black A, Brinton LA, Chang IS, Chen C, Chen C, Chen K, Cook LS, Crous Bou M, De Vivo I, Doherty J, Friedenreich CM, Gaudet MM, Haiman CA, Hankinson SE, Hartge P, Henderson BE, Hong YC, Hosgood HD 3rd, Hsiung CA, Hu W, Hunter DJ, Jessop L, Kim HN, Kim YH, Kim YT, Klein R, Kraft P, Lan Q, Lin D, Liu J, Le Marchand L, Liang X, Lissowska J, Lu L, Magliocco AM, Matsuo K, Olson SH, Orlow I, Park JY, Pooler L, Prescott J, Rastogi R, Risch HA, Schumacher F, Seow A, Setiawan VW, Shen H, Sheng X, Shin MH, Shu XO, VanDen Berg D, Wang JC, Wentzensen N, Wong MP, Wu C, Wu T, Wu YL, Xia L, Yang HP, Yang PC, Zheng W, Zhou B, Abnet CC, Albanes D, Aldrich MC, Amos C, Amundadottir LT, Berndt SI, Blot WJ, Bock CH, Bracci PM, Burdett L, Buring JE, Butler MA, Carreón T, Chatterjee N, Chung CC, Cook MB, Cullen M, Davis FG, Ding T, Duell EJ, Epstein CG, Fan JH, Figueroa JD, Fraumeni JF Jr, Freedman ND, Fuchs CS, Gao YT, Gapstur SM, Patiño-Garcia A, Garcia-Closas M, Gaziano JM, Giles GG, Gillanders EM, Giovannucci EL, Goldin L, Goldstein AM, Greene MH, Hallmans G, Harris CC, Henriksson R, Holly EA, Hoover RN, Hu N, Hutchinson A, Jenab M, Johansen C, Khaw KT, Koh WP, Kolonel LN, Kooperberg C, Krogh V, Kurtz RC, LaCroix A, Landgren A, Landi MT, Li D, Liao LM, Malats N, McGlynn KA, McNeill LH, McWilliams RR, Melin BS, Mirabello L, Peplonska B, Peters U, Petersen GM, Prokunina-Olsson L, Purdue M, Qiao YL, Rabe KG, Rajaraman P, Real FX, Riboli E, Rodríguez-Santiago B, Rothman N, Ruder AM, Savage SA, Schwartz AG, Schwartz KL, Sesso HD, Severi G, Silverman DT, Spitz MR, Stevens VL, Stolzenberg-Solomon R, Stram D, Tang ZZ, Taylor PR, Teras LR, Tobias GS, Viswanathan K, Wacholder S, Wang Z, Weinstein SJ, Wheeler W, White E, Wiencke JK, Wolpin BM, Wu X, Wunder JS, Yu K, Zanetti KA, Zeleniuch-Jacquotte A, Ziegler RG, de Andrade M, Barnes KC, Beaty TH, Bierut LJ, Desch KC, Doheny KF, Feenstra B, Ginsburg D, Heit JA, Kang JH, Laurie CA, Li JZ, Lowe WL, Marazita ML, Melbye M, Mirel DB, Murray JC, Nelson SC, Pasquale LR, Rice K, Wiggs JL, Wise A, Tucker M, Pérez-Jurado LA, Laurie CC, Caporaso NE, Yeager M, Chanock SJ. Am J Hum Genet. 2015 Mar 5;96(3):487-97. PMID: 25748358 PMCID: PMC4375431

Chronic Obstructive Pulmonary Disease and Subsequent Overall and Lung Cancer Mortality in Low-Income Adults.  Aldrich MC, Munro HM, Mumma M, Grogan EL, Massion PP, Blackwell TS, Blot WJ. PLoS ONE. 2015 Mar 26;10(3):e0121805. doi: 10.1371/journal.pone.0121805. eCollection 2015 PMCID: PMC4374870

Post lobectomy early complications. Ziarnik E, Grogan EL. Thoracic Surgery Clinics. 2015: June doi10.1016/j.thorsurg2015.04.003 PMID: 26210931  PMCID: PMC4606870

Using Clinical Risk Models for Lung Nodule Classification.                                                             Deppen SA, Grogan EL.                                                                                                                       Semin Thorac Cardiovasc Surg. 2015 Spring;27(1):30-5. doi: 10.1053/j.semtcvs.2015.04.001. Epub 2015 Apr 7. PMID:26074107 PMCID: PMC4560348

A reply to Bertolaccini et al.
Deppen SA, Blume J, Grogan EL.
J Thorac Oncol. 2015 Feb;10(2):e8-9. doi: 10.1097/JTO.0000000000000440.
PMID: 25611234

Heterogeneity in meta-analysis of FDG-PET studies to diagnose lung cancer--reply.
Blume JD, Deppen SA, Grogan EL.
JAMA. 2015 Jan 27;313(4):419-20. doi: 10.1001/jama.2014.16485.
PMID: 25626042

CYP2A6 reduced activity gene variants confer reduction in lung cancer risk in African American smokers-findings from two independent populations.
Wassenaar CA, Ye Y, Cai Q, Aldrich MC, Knight J, Spitz MR, Wu X, Blot WJ, Tyndale RF.
Carcinogenesis. 2015 Jan;36(1):99-103. doi: 10.1093/carcin/bgu235. Epub 2014 Nov 21.
PMID: 25416559 PMCID: PMC4291053

Validating drug repurposing signals using electronic health records: a case study of metformin associated with reduced cancer mortality.
Xu H*, Aldrich MC*, Chen Q, Liu H, Peterson NB, Dai Q, Levy M, Shah A, Han X, Ruan X, Jiang M, Li Y, Julien JS, Warner J, Friedman C, Roden DM, Denny JC.
J Am Med Inform Assoc. 2015 Jan;22(1):179-91. doi: 10.1136/amiajnl-2014-002649. Epub 2014 Jul 22. *Equal authorship
PMID: 25053577 PMCID: PMC4433365